CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0602900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os12g0602900 9640.m04010 - - 9e+0 Atmg00890 - S.X. H.G.
0.60 79.7 Os01g0347900 9629.m02377 - - 9e-1 At5g43680 unknown protein S.X. H.G.
0.60 79.7 Os11g0302900 AK065382.1 - The start codon is not identified. 6e-2 At1g35183 unknown protein S.X. H.G.
0.57 77.0 Os09g0257500 9637.m00607 - - 4e+0 Atmg00770 - S.X. H.G.
0.50 68.0 Os05g0468200 AK105507.1 - Conserved hypothetical protein 3e+0 At5g55610 unknown protein S.X. H.G.
0.40 51.1 Os05g0517300 9633.m04113 - - 3e-2 At5g22880 HTB2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
232.1 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.2 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.2 98.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.2 98.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.4 98.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 1e-12 73 Os12g0196100 9640.m00882 - - 3e+0 At3g29560 unknown protein C.G. S.X.
0.06 9e-20 97 Os02g0281900 9630.m01702 - Disease resistance protein family protein 6e-3 At3g01480 CYP38 (cyclophilin 38) C.G. S.X.
0.05 2e-17 89 Os10g0110600 9638.m00124 - TGF-beta receptor, type I/II extracellular regionfamily protein 2e-1 At1g62200 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.03 1e-12 73 Os10g0358100 AK106577.1 - Conserved hypothetical protein 4e-1 At5g09940 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 9e+0 30 Arabidopsis thaliana Atmg00890 - - hypothetical protein - - - C.G. S.X.
0.06 8e-1 34 Glycine max HgAffx.13638.1.S1_at CB374344 - - 1e-1 At1g62240 unknown protein C.G. S.X.
0.04 3e-1 34 Hordeum vulgare Contig7928_s_at Contig7928 - - 5e-3 At2g35830 unknown protein C.G. S.X.
0.05 3e+0 32 Populus trichocarpa PtpAffx.88366.1.A1_at CV269891 hypothetical protein - 4e-1 At1g68590 plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative C.G. S.X.
0.04 2e+0 32 Triticum aestivum TaAffx.78794.1.S1_at CA727193 - - 3e-1 At1g18280 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.04 2e-1 34 Vitis vinifera 1619698_at CA816208 hypothetical protein LOC100251545 /// hypothetical LOC100246402 /// hypothetical protein LOC100250593 /// hypothetical LOC100256674 - 1e+0 At1g52720 unknown protein C.G. S.X.
0.03 2e-1 34 Zea mays Zm.1170.1.A1_at AI691265 hypothetical protein LOC100216967 - 6e+0 At5g50890 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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