Gene omics information

Query gene ID Os12g0581600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.1Os12g0581600AK071485.1-Integral membrane protein7e-8At1g47240NRAMP2S.X.H.G.
0.4660.9Os05g0509900AK072992.1-Transcription initiation factor IIF, beta subunitfamily protein2e-7At3g52270ATP binding / RNA polymerase II transcription factorS.X.H.G.
0.094.9Os12g0502400AK111001.1-3-phosphoserine phosphatase4e-2At1g18640-S.X.H.G.
0.094.9Os02g0199500AK071208.1-Cyclin-like F-box domain containing protein4e+0At5g28950unknown proteinS.X.H.G.
0.042.0Os06g0565900AK066838.1--2e-48At1g72700haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.031.4Os03g0125700AK062913.1-Conserved hypothetical protein6e+0At4g03827unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.099.5GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigma
9.197.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.597.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.497.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.197.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.097.0GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigma
5.696.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.696.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.396.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.896.5GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigma
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.374e-97357Os03g0607400AK069904.1-Natural resistance-associated macrophage proteinfamily protein1e-9At1g47240NRAMP2C.G.S.X.
0.223e-64248Os03g0208500AK065481.1-Integral membrane protein1e-12At5g67330ATNRAMP4C.G.S.X.
0.071e-29133Os01g0941000NM_189710.1--4e-5At5g46780VQ motif-containing proteinC.G.S.X.
0.074e-20101Os01g0732900NM_191548.1-Hypothetical protein5e+0At2g35100ARAD1 (ARABINAN DEFICIENT 1)C.G.S.X.
0.022e-346Os12g01930009640.m00846--2e+0At2g25720unknown proteinC.G.S.X.
0.028e-344Os07g01928009635.m00913-AAA ATPase, central region domain containingprotein5e-3At4g21620glycine-rich proteinC.G.S.X.
0.018e-344Os01g07758009629.m05564--5e-1At5g23680sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.177e-859Arabidopsis thalianaAt1g47240841127NRAMP2Member of the NRAMP2 gene family of metal ion transporters.---C.G.S.X.
0.142e-552Glycine maxGmaAffx.46439.1.S1_atBE806279--5e-25At1g47240NRAMP2C.G.S.X.
0.023e-240Hordeum vulgareContig19066_atContig19066--4e-1At5g47550cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.136e-344Populus trichocarpaPtpAffx.218535.1.S1_atpmrna34191nramp transporter-4e-64At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)C.G.S.X.
0.189e-23109Triticum aestivumTa.15473.1.S1_atCA484906--2e-2At1g47240NRAMP2C.G.S.X.
0.027e-238Vitis vinifera1617338_atBQ793025hypothetical protein LOC100262579-2e-22At1g47240NRAMP2C.G.S.X.
0.063e-859Zea maysZm.13647.1.S1_atAY107242.1metal transporter Nramp3-3e-12At5g67330ATNRAMP4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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