Gene omics information

Query gene ID Os12g0578400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4660.9Os12g0578400AK060767.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein3e-4At5g61250AtGUS1 (Arabidopsis thaliana glucuronidase 1)S.X.H.G.
0.6079.7Os04g0531400AK105289.1-Receptor like protein kinase2e-2At4g02420lectin protein kinase, putativeS.X.H.G.
0.2219.4Os03g0700700AK072689.1-Lipoxygenase (EC 1.13.11.12)3e-5At3g22400LOX5S.X.H.G.
0.073.7Os04g0506100AK059053.1-Receptor-like protein kinase5e-21At5g63930leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.021.0Os05g04141009633.m03166-Transcription factors TFIIS, elongin A, CRSP70,conserved domain containing protein2e-2At5g11930glutaredoxin family proteinS.X.H.G.
0.021.0Os07g0551400AK109507.1-Universal stress protein (Usp) family protein1e-11At1g11360universal stress protein (USP) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.399.1GSM159197Inflorescence (P3, 5 - 10 cm), biological rep 3GSE6893Expression data for reproductive development in rice
19.799.1GSM159200Inflorescence (P4, 10 - 15 cm), biological rep 3GSE6893Expression data for reproductive development in rice
18.999.0GSM159204Inflorescence (P6, 22 - 30 cm), biological rep 1GSE6893Expression data for reproductive development in rice
18.098.9GSM159205Inflorescence (P6, 22 - 30 cm), biological rep 2GSE6893Expression data for reproductive development in rice
15.698.7GSM159206Inflorescence (P6, 22 - 30 cm), biological rep 3GSE6893Expression data for reproductive development in rice
10.498.1GSM159196Inflorescence (P3, 5 - 10 cm), biological rep 2GSE6893Expression data for reproductive development in rice
9.397.9GSM159195Inflorescence (P3, 5 - 10 cm), biological rep 1GSE6893Expression data for reproductive development in rice
8.497.7GSM159199Inflorescence (P4, 10 - 15 cm), biological rep 2GSE6893Expression data for reproductive development in rice
8.197.7GSM159198Inflorescence (P4, 10 - 15 cm), biological rep 1GSE6893Expression data for reproductive development in rice
7.997.6GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-1483Os03g0211700AK105099.1--3e-4At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.054e-861Os02g0802200AK107538.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein2e-2At5g34940AtGUS3 (Arabidopsis thaliana glucuronidase 3)C.G.S.X.
0.034e-1481Os06g0179000AK065263.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein3e-1At5g34940AtGUS3 (Arabidopsis thaliana glucuronidase 3)C.G.S.X.
0.011e-140Os01g0672300AK107129.1-Hypothetical protein2e-1At1g72080unknown proteinC.G.S.X.
0.015e-138Os01g03617009629.m02525-Phospholipid/glycerol acyltransferase familyprotein1e+0At1g54570esterase/lipase/thioesterase family proteinC.G.S.X.
0.012e+036Os04g03444009632.m02613--3e+0At5g14440-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.093e-448Arabidopsis thalianaAt5g61250836246AtGUS1 (Arabidopsis thaliana glucuronidase 1)Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.---C.G.S.X.
0.072e-1275Glycine maxGma.17095.2.S1_atBU763986--3e+0At5g61250AtGUS1 (Arabidopsis thaliana glucuronidase 1)C.G.S.X.
0.111e-1171Hordeum vulgareContig13120_atContig13120--3e-5At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.054e-448Populus trichocarpaPtpAffx.214528.1.S1_atpmrna28241hypothetical protein-2e-19At5g34940AtGUS3 (Arabidopsis thaliana glucuronidase 3)C.G.S.X.
0.602e-134480Triticum aestivumTa.4061.1.S1_atBJ283947--1e-2At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.092e-859Vitis vinifera1619954_atCB974333hypothetical protein LOC100257028-7e-16At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.132e-1997Zea maysZmAffx.147.1.S1_atAI667831Hypothetical protein LOC100192026-3e+0At2g20260PSAE-2 (photosystem I subunit E-2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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