CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0567000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os12g0567000 AK109171.1 - Hypothetical protein 4e-1 At2g41120 unknown protein S.X. H.G.
0.53 71.3 Os10g0510300 9638.m03269 - Plant specific of unknown function DUF860 familyprotein 9e-3 At1g06440 ubiquitin thiolesterase S.X. H.G.
0.38 46.9 Os03g0119700 AK105249.1 - TPR-like domain containing protein 9e-29 At3g07160 ATGSL10 (glucan synthase-like 10) S.X. H.G.
0.33 38.8 Os09g0559100 9637.m03287 - Zn-finger, cysteine-rich C6HC domain containingprotein 3e+0 At1g71430 unknown protein S.X. H.G.
0.27 27.5 Os05g0477100 AK108641.1 - Conserved hypothetical protein 2e-4 At5g01840 OFP1 (OVATE FAMILY PROTEIN 1) S.X. H.G.
0.10 5.7 Os02g0727400 AK068514.1 - Conserved hypothetical protein 3e+0 At5g51940 NRPB6A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.3 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
27.6 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.3 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.2 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 3e-154 545 Os12g0566800 9640.m03685 - Hypothetical protein 6e-1 At3g09470 - C.G. S.X.
0.25 2e-10 67 Os12g0566900 AK107030.1 - Conserved hypothetical protein 3e-2 At5g67060 HEC1 (HECATE 1) C.G. S.X.
0.07 2e-4 48 Os10g0148200 9638.m00489 - - 3e+0 At2g32210 unknown protein C.G. S.X.
0.02 2e-4 48 Os06g0712800 AK121236.1 - Ankyrin-like protein 1e+0 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) C.G. S.X.
0.01 3e-3 44 Os07g0557500 AK101830.1 - Zn-finger, RING domain containing protein 8e-2 At1g55160 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 36 Arabidopsis thaliana At2g41120 818711 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;BOP - - - C.G. S.X.
0.03 1e-1 38 Glycine max PsAffx.psZS006xI19f_s_at PsAffx.psZS006xI19f - - 9e-2 At5g05910 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.09 2e-4 46 Hordeum vulgare Contig6634_at Contig6634 - - 9e-4 At3g09470 - C.G. S.X.
0.04 3e-2 40 Populus trichocarpa PtpAffx.224082.1.S1_x_at pmrna42319 hypothetical protein - 1e-2 At5g61030 GR-RBP3 (glycine-rich RNA-binding protein 3) C.G. S.X.
0.30 3e-51 202 Triticum aestivum TaAffx.78349.1.S1_at CA653385 - - 4e-1 At5g46340 O-acetyltransferase-related C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1615408_at CF201095.1 - - 2e-1 Atmg00940 - C.G. S.X.
0.04 1e-2 40 Zea mays Zm.17825.1.S1_at CK368617 - - 3e-1 At4g28180 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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