Gene omics information

Query gene ID Os12g0542500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os12g05425009640.m03462--1e+1At5g63100unknown proteinS.X.H.G.
0.8094.6Os11g0208600AK106458.1-Hypothetical protein4e+0At2g29420ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)S.X.H.G.
0.8094.6Os11g07028009639.m04456--1e+0At5g64816unknown proteinS.X.H.G.
0.6787.2Os01g0371400NM_193841.1-Glutathione S-transferase, C-terminal domaincontaining protein5e-3At3g62760ATGSTF13S.X.H.G.
0.6787.2Os03g04229009631.m03030--5e+0At5g11300CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS)S.X.H.G.
0.5371.3Os03g0604700AK064243.1-Hypothetical protein3e-4At1g49870-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
212.4100.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
96.2100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
8.897.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.597.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.497.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.997.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.797.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.597.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.497.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.397.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Os04g0438700AK060634.1-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein3e+0At1g09030NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4)C.G.S.X.
0.021e+034Os05g0209600AY580163.1-Lipolytic enzyme, G-D-S-L family protein2e-1At5g03980GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.011e+034Os01g0113800AK111700.1-Protein kinase family protein3e-4At5g38280PR5KC.G.S.X.
0.015e+032Os03g03246009631.m02073-Disease resistance protein family protein4e-1At1g68680unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+130Arabidopsis thalianaAt5g63100836430unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;PBOFM---C.G.S.X.
0.051e+130Glycine maxPsAffx.psMA007xP10f_s_atPsAffx.psMA007xP10f--3e+0At1g80520-C.G.S.X.
0.053e-134Hordeum vulgareS0000800242C04F1_x_atS0000800242C04F1--1e+0At1g54530calcium-binding EF hand family proteinC.G.S.X.
0.034e+032Populus trichocarpaPtpAffx.24672.2.A1_a_atCV273679hypothetical protein-6e-18At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.042e-136Triticum aestivumTaAffx.124221.1.S1_x_atBQ608586--7e-2At3g18700-C.G.S.X.
0.031e+128Vitis vinifera1620871_atCF511262--2e+1At5g56070unknown proteinC.G.S.X.
0.031e+032Zea maysZm.18066.1.A1_atAI738164hypothetical protein LOC100272811-3e-2At2g16860GCIP-interacting family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage