Gene omics information

Query gene ID Os12g0541000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os12g05410009640.m03442-Lumazine-binding protein family protein2e+0At5g54530unknown proteinS.X.H.G.
0.2931.1Os12g0533800AK071593.1-Mitochondrial substrate carrier family protein8e-1At2g11005glycine-rich proteinS.X.H.G.
0.2931.1Os07g0265100AK111251.1-Hypothetical protein4e+0At2g07310unknown proteinS.X.H.G.
0.2117.9Os02g0558500AK072724.1-Conserved hypothetical protein3e+0At5g65480unknown proteinS.X.H.G.
0.084.2Os08g0484700CB682631-Homeodomain-like containing protein3e-2At4g20290unknown proteinS.X.H.G.
0.052.5Os01g0355900AK120976.1-Peptidase C48, SUMO/Sentrin/Ubl1 family protein2e-8At4g15880ESD4 (EARLY IN SHORT DAYS 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.199.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
17.898.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.098.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.398.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.698.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.298.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.198.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.598.3GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.598.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.598.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-240Os09g05542669637.m03247--2e+0At4g03050AOP3C.G.S.X.
0.024e-344Os03g0793100AK067897.1-Conserved hypothetical protein2e-1At5g56600PRF3 (PROFILIN 3)C.G.S.X.
0.026e-240Os01g0266500AK101084.1-Phenazine biosynthesis PhzC/PhzF protein familyprotein9e+0At5g55570unknown proteinC.G.S.X.
0.026e-240Os01g0524500AY151042.1-Transcription factor MYBS31e-2At5g58900myb family transcription factorC.G.S.X.
0.016e-240Os01g0228400AK105248.1-TPR-like domain containing protein2e-2At5g67580TRB2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt5g54530835541unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;P---C.G.S.X.
0.105e-1789Glycine maxGma.3055.1.S1_atBM307497--3e-33At2g20690lumazine-binding family proteinC.G.S.X.
0.235e-30131Hordeum vulgareContig15780_atContig15780--3e-1At2g42760unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.223848.1.S1_atpmrna42067hypothetical protein-6e-1At5g07900mitochondrial transcription termination factor family protein / mTERF family proteinC.G.S.X.
0.374e-60232Triticum aestivumTa.7982.1.S1_x_atBQ239256--3e+0At4g16140proline-rich family proteinC.G.S.X.
0.032e+032Vitis vinifera1607038_atCB348082--1e+1At5g57170macrophage migration inhibitory factor family protein / MIF family proteinC.G.S.X.
0.035e-238Zea maysZmAffx.828.1.S1_atAI770529--3e+0At2g32890RALFL17 (RALF-LIKE 17)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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