CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0518200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os12g0518200 AK070844.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g26290 unknown protein S.X. H.G.
0.67 87.2 Os01g0160800 AB051108.1 - Protein synthesis inhibitor II (EC 3.2.2.22)(Ribosome-inactivating protein II) (rRNA N-glycosidase) 7e-1 At2g43570 chitinase, putative S.X. H.G.
0.55 73.7 Os04g0618700 AK120799.1 - Protein kinase domain containing protein 2e+0 At3g56210 binding S.X. H.G.
0.50 68.0 Os01g0963000 AK109480.1 - Peroxidase BP 1 precursor 6e-1 At5g40150 peroxidase, putative S.X. H.G.
0.08 4.2 Os02g0605900 AK064754.1 - Chitinase (EC 3.2.1.14) A 5e-1 At3g54420 ATEP3 S.X. H.G.
0.03 1.4 Os11g0212900 AK111542.1 - Hypothetical protein 4e-4 At5g55630 ATKCO1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.8 99.9 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
32.1 99.7 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
32.0 99.7 GSM421670 XOC, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
29.7 99.7 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
23.2 99.3 GSM421709 MOCK, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
21.3 99.2 GSM421689 XOO, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.2 98.7 GSM421688 XOO, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.1 98.5 GSM421687 XOO, 2 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.8 98.3 GSM278844 WuYun3-RSV infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
11.4 98.2 GSM421690 XOO, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 3e-69 264 Os11g0136200 9639.m00325 - - 5e-1 Atmg01120 - C.G. S.X.
0.10 2e-8 61 Os01g0207700 NM_188356.1 - Protein of unknown function DUF6 domain containingprotein 1e-1 At5g28630 glycine-rich protein C.G. S.X.
0.06 1e-13 79 Os01g0208000 AK108020.1 - Hypothetical protein 2e-1 At3g58850 PAR2 (PHY RAPIDLY REGULATED 2) C.G. S.X.
0.06 2e-11 71 Os01g0207900 NM_188358.1 - Protein of unknown function DUF6 domain containingprotein 2e-3 At1g54410 dehydrin family protein C.G. S.X.
0.06 2e-2 42 Os02g0474300 AK122152.1 - Hypothetical protein 6e-7 At4g31210 DNA topoisomerase family protein C.G. S.X.
0.06 2e-2 42 Os05g0106200 AK107666.1 - Protein of unknown function DUF6 domain containingprotein 2e-1 At5g28630 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At4g26290 828735 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO - - - C.G. S.X.
0.02 4e+0 34 Glycine max HgAffx.7212.1.A1_at BI396828 - - 5e-1 At3g59320 integral membrane protein, putative C.G. S.X.
0.02 9e-2 38 Hordeum vulgare HB01C06r_at HB01C06r - - 1e+0 At5g27541 C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.57928.2.S1_at BI120751 hypothetical protein - 1e+0 At3g52990 pyruvate kinase, putative C.G. S.X.
0.03 1e-2 42 Triticum aestivum TaAffx.105485.1.S1_at CA733579 - - 3e-1 At5g44170 - C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1614172_at CF514056 - - 4e+0 At4g27280 calcium-binding EF hand family protein C.G. S.X.
0.02 5e+0 32 Zea mays Zm.17757.1.S1_at CK371299 polygalacturonase inhibitor 1 - 1e+0 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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