Gene omics information

Query gene ID	Os12g0514000
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	82.7	Os12g0514000	AK099395.1	-	Sugar transporter family protein	6e-2	At3g18830	ATPLT5 (POLYOL TRANSPORTER 5)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.61	81.2	Os01g0717400	AK072165.1	-	Alliinase EGF-like domain containing protein	9e-1	At5g44860	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.13	8.2	Os10g0421800	AK119359.1	-	Protein prenyltransferase domain containingprotein	5e-1	At5g49700	DNA-binding protein-related	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.12	7.2	Os01g0227500	AK120914.1	-	Cytochrome P450 family protein	2e-1	At4g33960	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	5.7	Os02g0206100	AK066593.1	-	The start codon is not identified.	4e+0	At3g60550	CYCP3	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	5.7	Os07g0569600	AK067599.1	-	Conserved hypothetical protein	7e-12	At5g19855	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	5.7	Os01g0810100	AK071916.1	-	Ribonuclease III domain containing protein	3e-22	At4g37510	ribonuclease III family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.6	99.4	GSM421695	XOO, 8 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
20.8	99.2	GSM421717	MOCK, 8 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
20.3	99.1	GSM421675	XOC, 8 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
18.5	99.0	GSM421715	MOCK, 8 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.5	98.7	GSM421716	MOCK, 8 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.2	98.5	GSM421677	XOC, 8 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.2	98.3	GSM421698	XOO, 8 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.9	98.1	GSM421676	XOC, 8 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.7	98.1	GSM421678	XOC, 8 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.4	98.1	GSM421696	XOO, 8 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	2e-15	85	Os11g0637200	AK106745.1	-	Sugar transporter protein	3e-3	At3g18830	ATPLT5 (POLYOL TRANSPORTER 5)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	1e-16	89	Os11g0637400	BI799785	-	Sorbitol transporter	2e-8	At1g27350	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.18	2e-21	105	Os03g0197200	AK073216.1	-	Sorbitol transporter	1e-5	At3g18830	ATPLT5 (POLYOL TRANSPORTER 5)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.13	5e-10	67	Os07g0582500	AK119464.1	-	Sugar transporter family protein	2e-4	At2g16130	mannitol transporter, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.12	1e-13	79	Os01g0966900	9629.m07289	-	Sorbitol transporter	1e-14	At3g18830	ATPLT5 (POLYOL TRANSPORTER 5)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	2e-12	75	Os07g0582400	AF416867.1	-	Sorbitol transporter	2e-5	At2g18480	mannitol transporter, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-2	40	Arabidopsis thaliana	At3g18830	821416	ATPLT5 (POLYOL TRANSPORTER 5)	This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The AtPLT5 symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e-2	42	Glycine max	Gma.6579.2.S1_at	AW233874	-	-	2e-8	At5g28220	binding	C.G.	S.X.	Please select
0.58	9e-126	450	Hordeum vulgare	Contig13546_at	Contig13546	-	-	3e+0	At3g62528	unknown protein	C.G.	S.X.	Please select
0.02	8e-2	40	Populus trichocarpa	PtpAffx.203189.1.S1_at	pmrna6323	hypothetical protein	-	2e+0	At3g45150	TCP16 (TCP domain protein 16)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	1e-12	75	Triticum aestivum	TaAffx.105480.1.S1_at	CA733618	-	-	2e-5	At3g18830	ATPLT5 (POLYOL TRANSPORTER 5)	C.G.	S.X.	Please select
0.03	2e-5	50	Vitis vinifera	1610527_at	CA815926	hypothetical protein LOC100260552	-	4e-3	At3g18830	ATPLT5 (POLYOL TRANSPORTER 5)	C.G.	S.X.	Please select
0.09	1e-10	67	Zea mays	Zm.19048.1.A1_at	AI857148	carbohydrate transporter/ sugar porter	-	1e+0	At4g26080	ABI1 (ABA INSENSITIVE 1)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage