Gene omics information

Query gene ID Os12g0489800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9299.1Os12g0489800AK102385.1-NBS-LRR protein (Fragment)2e+0At5g63225-S.X.H.G.
0.2016.5Os11g0160300AK070490.1-Protein kinase domain containing protein1e-2At3g18750WNK6 (WITH NO K (=LYSINE) 6)S.X.H.G.
0.138.2Os02g0173000AK119397.1-Conserved hypothetical protein1e+0At4g33860glycosyl hydrolase family 10 proteinS.X.H.G.
0.116.5Os08g0446400AK102368.1-Leucine-rich repeat, plant specific containingprotein3e+0At5g52840NADH-ubiquinone oxidoreductase-relatedS.X.H.G.
0.094.9Os03g01836009631.m00798-Alanine aminotransferase5e-11At1g17290AlaAT1 (ALANINE AMINOTRANSFERAS)S.X.H.G.
0.063.0Os11g0154300AK072969.1-Protein of unknown function DUF584 family protein3e-2At3g11200AL2 (ALFIN-LIKE 2)S.X.H.G.
0.052.5Os02g0253700AK072542.1-Conserved hypothetical protein2e+0At3g57950unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.3100.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
22.999.3GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
22.699.3GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
21.199.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.898.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.598.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.498.7GSM359920Pokkali root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.098.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.798.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.498.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-967Os04g03748009632.m02903-Disease resistance protein family protein8e-1At1g24020MLP423 (MLP-LIKE PROTEIN 423)C.G.S.X.
0.054e-656Os02g02819009630.m01702-Disease resistance protein family protein6e-3At3g01480CYP38 (cyclophilin 38)C.G.S.X.
0.051e-244Os02g02825009630.m01709-NBS-LRR protein (Fragment)3e-1At1g32990PRPL11 (PLASTID RIBOSOMAL PROTEIN L11)C.G.S.X.
0.042e-863Os02g0281200AK063172.1-Disease resistance protein family protein5e-1At2g336303-beta hydroxysteroid dehydrogenase/isomerase family proteinC.G.S.X.
0.042e-450Os04g03756009632.m02911--1e+0At3g44800meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.032e-450Os04g03753009632.m02908-Disease resistance protein family protein2e+0At1g24020MLP423 (MLP-LIKE PROTEIN 423)C.G.S.X.
0.021e-244Os05g02169009633.m01122--1e-1At4g19270unknown proteinC.G.S.X.
0.019e-448Os06g02685009634.m01581--2e+0At3g49200unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+036Arabidopsis thalianaAt5g632255008330-glycosyl hydrolase family protein 17---C.G.S.X.
0.016e-138Glycine maxGma.4974.1.A1_s_atBI970228--9e-1At4g18210ATPUP10C.G.S.X.
0.018e-136Hordeum vulgareHVSMEm0013I03r2_atHVSMEm0013I03r2--5e+0At3g08990yippee family proteinC.G.S.X.
0.012e-140Populus trichocarpaPtpAffx.209026.1.S1_atpmrna17876cytochrome P450-4e-1At5g38450CYP735A1C.G.S.X.
0.012e+036Triticum aestivumTaAffx.28897.1.S1_atCA654826--4e+0At1g65483unknown proteinC.G.S.X.
0.012e+034Vitis vinifera1621711_atCF405426hypothetical protein LOC100264431-6e-24At4g22670AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)C.G.S.X.
0.012e-138Zea maysZm.783.1.A1_atAY105282.1--1e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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