Gene omics information

Query gene ID Os12g0485300
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os12g0485300AK064188.1-Hypothetical protein3e-1At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)S.X.H.G.
0.2524.1Os07g0287100AK066004.1-TPR-like domain containing protein8e-5At1g78915bindingS.X.H.G.
0.105.7Os09g0515400AK103734.1-Conserved hypothetical protein2e+0At1g80700unknown proteinS.X.H.G.
0.042.0Os06g0103600AK072800.1-Aminoacyl-t-RNA synthetase precursor8e-46At3g48110EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1)S.X.H.G.
0.042.0Os05g0193800AK067940.1-Conserved hypothetical protein2e+0At1g70120unknown proteinS.X.H.G.
0.010.5Os05g0544900AK109267.1-Hypothetical protein5e-1At4g23770unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.699.1GSM159185Y Leaf, biological rep 3GSE6893Expression data for reproductive development in rice
15.698.7GSM1592617-day-old Seedling, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
15.398.7GSM1592597-day-old Seedling, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
11.498.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.298.2GSM1592607-day-old Seedling, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
10.698.1GSM159183Y Leaf, biological rep 1GSE6893Expression data for reproductive development in rice
9.097.8GSM159180Mature leaf, biological rep 1GSE6893Expression data for reproductive development in rice
8.797.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.597.7GSM159265Salt stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
8.497.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-136Os10g04516019638.m02711--4e-3At1g30475-C.G.S.X.
0.036e-136Os04g04752009632.m03792--1e-1At3g44950glycine-rich proteinC.G.S.X.
0.022e-138Os02g0701600AK071763.1-Tocopherol O-methyltransferase, chloroplastprecursor (EC 2.1.1.95) (Gamma-tocopherolmethyltransferase)3e-6At1g64970G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)C.G.S.X.
0.026e-136Os05g0369500AK070770.1-Conserved hypothetical protein4e+0At5g02810PRR7 (PSEUDO-RESPONSE REGULATOR 7)C.G.S.X.
0.012e+034Os06g06385009634.m04167-Protein kinase domain containing protein3e-4At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt4g13850827019GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.---C.G.S.X.
0.037e+032Glycine maxPsAffx.psZO011iD01r_s_atPsAffx.psZO011iD01r--7e-2At1g49720ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1)C.G.S.X.
0.036e-134Hordeum vulgareEBem05_SQ003_E07_atEBem05_SQ003_E07--5e-2At1g27710glycine-rich proteinC.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.203128.1.S1_atpmrna6204hypothetical protein-2e-1At1g62240unknown proteinC.G.S.X.
0.035e+032Triticum aestivumTaAffx.98966.1.S1_atCA631776--2e-2At5g64460-C.G.S.X.
0.031e+032Vitis vinifera1620986_atCF372684--2e-2At2g31957LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75)C.G.S.X.
0.032e+032Zea maysZm.15877.1.A1_x_atBM339646IDP2581 protein-1e+1At3g62990unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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