Gene omics information

Query gene ID Os12g0478200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os12g0478200AK063578.1-GRAM domain containing protein4e-4At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedS.X.H.G.
0.7391.1Os07g0154100AK119780.1-The start codon is not identified.3e-4At3g14440NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3)S.X.H.G.
0.6787.2Os07g0687900D26537.1-WSI76 protein induced by water stress4e-24At1g09350AtGolS3 (Arabidopsis thaliana galactinol synthase 3)S.X.H.G.
0.6787.2Os09g0325700AK063334.1-Protein phosphatase 2C (EC 3.1.3.16) (PP2C)7e-1At5g06210RNA-binding protein, putativeS.X.H.G.
0.5068.0Os03g01251009631.m00248-Beta-carotene hydroxylase1e-11At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)S.X.H.G.
0.5068.0Os03g0268600AK069274.1-Protein phosphatase type 2C2e-1At5g59220protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
50.299.9GSM159263Drought stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
44.099.9GSM159262Drought stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
43.199.9GSM159264Drought stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
31.399.7GSM278855KT95-418-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
16.898.8GSM159266Salt stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
15.298.7GSM159267Salt stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
14.198.5GSM159265Salt stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
11.398.2GSM278849WuYun3-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.397.7GSM159210Seed (S2, 3 - 4 dap), biological rep 1GSE6893Expression data for reproductive development in rice
6.297.1GSM159211Seed (S2, 3 - 4 dap), biological rep 2GSE6893Expression data for reproductive development in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-757Os04g0397500AU174699-Myb, DNA-binding domain containing protein2e-1At2g25670unknown proteinC.G.S.X.
0.043e-859Os03g0751600AK105937.1-Heavy metal transport/detoxification proteindomain containing protein9e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.033e-344Os07g0621300AK071567.1-GRAM domain containing protein9e-6At2g22475GEM (GL2-EXPRESSION MODULATOR)C.G.S.X.
0.025e-756Os03g0359100AK063182.1-Branched-chain-amino-acid aminotransferase-likeprotein 1 (Atbcat- like)9e-8At5g27410aminotransferase class IV family proteinC.G.S.X.
0.023e-344Os04g0613200AK109490.1-Pectin lyase-like family protein2e-1At5g46030unknown proteinC.G.S.X.
0.023e-344Os05g0127500AK068517.1-Leucoanthocyanidin dioxygenase-like protein8e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)C.G.S.X.
0.023e-344Os07g0240200AK068978.1-Beta-1,3 glucanase precursor (EC 3.2.1.39)3e+0At3g46570glycosyl hydrolase family 17 proteinC.G.S.X.
0.021e-242Os12g05274009640.m03310--8e-1At4g05400unknown proteinC.G.S.X.
0.011e-242Os06g06630009634.m04389--4e+0At3g08680leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-446Arabidopsis thalianaAt5g23360832400GRAM domain-containing protein / ABA-responsive protein-relatedF:unknown;P:biological_process unknown;C:unknown;P---C.G.S.X.
0.035e-136Glycine maxGmaAffx.58462.1.S1_atBI974345--1e-2At3g12360ITN1 (INCREASED TOLERANCE TO NACL)C.G.S.X.
0.343e-49194Hordeum vulgareHC112E03_T3_s_atHC112E03_T3ABA-responsive protein-1e-3At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.061e-138Populus trichocarpaPtpAffx.76893.1.A1_atCV245861hypothetical protein-9e-2At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.327e-89327Triticum aestivumTa.27945.1.S1_x_atCK216098--3e-3At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.034e-134Vitis vinifera1610864_atCF606964--3e+0At2g41420proline-rich family proteinC.G.S.X.
0.074e-548Zea maysZm.8843.1.A1_atBM266672FIP1-1e+0At4g40100ABA-responsive protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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