Gene omics information

Query gene ID Os12g0455000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5676.3Os12g0455000AK111239.1-Conserved hypothetical protein1e+0At4g09450myb family transcription factorS.X.H.G.
0.8094.6Os10g0334500NM_195796.1-Conserved hypothetical protein2e-2At1g07700thioredoxin family proteinS.X.H.G.
0.7391.1Os07g01749009635.m00735-Plant lipid transfer protein/Par allergen familyprotein5e+0At5g26890unknown proteinS.X.H.G.
0.6787.2Os01g0127000AK105526.1-Multicopper oxidase, type 1 domain containingprotein4e+0At5g02270ATNAP9S.X.H.G.
0.5573.7Os06g0169900CB096301-Hypothetical protein5e-1At5g1432030S ribosomal protein S13, chloroplast (CS13)S.X.H.G.
0.5068.0Os02g0791400AK062787.1-Cytochrome oxidase c, subunit VIb family protein6e+0At2g47910CRR6 (chlororespiratory reduction 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.199.5GSM359907FL478 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
24.999.5GSM359920Pokkali root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
24.699.4GSM359924Pokkali root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
23.399.4GSM359911IR29 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
20.099.1GSM359910IR29 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
19.999.1GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
19.599.1GSM359921Pokkali root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
19.399.0GSM359918IR63731 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
17.398.9GSM359912IR29 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.698.7GSM359906FL478 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Os07g0692200NM_185562.1-Protein of unknown function DUF588 family protein1e+0At5g60800heavy-metal-associated domain-containing proteinC.G.S.X.
0.036e-136Os01g03406009629.m02297-Hypothetical protein3e+1At5g18970AWPM-19-like membrane family proteinC.G.S.X.
0.026e-136Os06g0592400AK062788.1-Cytosolic aldehyde dehydrogenase RF2C4e+0At3g27503SCRL19 (SCR-Like 19)C.G.S.X.
0.026e-136Os11g01765009639.m00691--5e-1At1g26945KDR (KIDARI)C.G.S.X.
0.011e-138Os01g0958500AK072960.1-RNA binding protein-like1e-6At1g78260RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.016e-136Os01g01253009629.m00260--4e+0At5g29070-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt4g09450826528myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POM---C.G.S.X.
0.041e-138Glycine maxPsAffx.CL402Contig1_atPsAffx.CL402Contig1--4e+0At1g78410VQ motif-containing proteinC.G.S.X.
0.035e-134Hordeum vulgareContig8521_s_atContig8521--4e+0At5g05987PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.205954.1.S1_atpmrna11817hypothetical protein-6e+0At1g63970ISPFC.G.S.X.
0.061e-654Triticum aestivumTa.10297.3.S1_atBJ246509--4e+0At1g31390meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.035e+030Vitis vinifera1615678_atCF202538.1--3e-19At1g64520RPN12a (Regulatory Particle non-ATPase 12a)C.G.S.X.
0.032e+032Zea maysZm.17163.1.A1_atBM378304--1e+0At2g24870self-incompatibility protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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