CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0448100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os12g0448100 9640.m02506 - - 1e+0 At4g16240 unknown protein S.X. H.G.
0.80 94.6 Os05g0116600 AK109828.1 - Cyclin-like F-box domain containing protein 3e+0 At2g27720 60S acidic ribosomal protein P2 (RPP2A) S.X. H.G.
0.71 89.6 Os05g0225100 AK109834.1 - Conserved hypothetical protein 2e-1 At1g02065 SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8) S.X. H.G.
0.67 87.2 Os04g0422700 AK111485.1 - Conserved hypothetical protein 5e-1 At2g11005 glycine-rich protein S.X. H.G.
0.57 77.0 Os10g0404600 9638.m02259 - - 4e+0 At5g28410 unknown protein S.X. H.G.
0.55 73.7 Os08g0515100 NM_188989.1 - Sulfotransferase family protein 2e-3 At3g45080 sulfotransferase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
220.2 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
52.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.1 98.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.2 98.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1 98.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.0 97.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 8e-7 56 Os11g0151001 9639.m00450 - - 3e+0 At5g67520 adenylylsulfate kinase, putative C.G. S.X.
0.06 1e-24 115 Os09g0509700 AK120589.1 - Hd1 2e-1 At2g32890 RALFL17 (RALF-LIKE 17) C.G. S.X.
0.04 1e-2 42 Os08g0173500 9636.m00709 - - 8e-1 At5g04470 SIM (SIAMESE) C.G. S.X.
0.02 3e-3 44 Os08g0562600 AK064971.1 - C2 domain containing protein 1e-2 At1g07310 C2 domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At4g16240 827318 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVA - - - C.G. S.X.
0.04 3e-2 40 Glycine max Gma.1278.1.S1_a_at BE020433 - - 4e-20 At1g03900 ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4) C.G. S.X.
0.03 1e-2 40 Hordeum vulgare Contig15346_at Contig15346 - - 4e+0 At4g17040 ATP-dependent Clp protease proteolytic subunit, putative C.G. S.X.
0.05 1e-1 38 Populus trichocarpa PtpAffx.208221.1.S1_at pmrna16362 - - 1e+0 At1g63110 cell division cycle protein-related C.G. S.X.
0.03 1e-1 38 Triticum aestivum TaAffx.51464.1.S1_at CA724117 - - 1e+1 At1g59970 matrixin family protein C.G. S.X.
0.03 3e-2 38 Vitis vinifera 1612884_at CA810969 - - 4e+0 At3g24513 - C.G. S.X.
0.04 1e-2 40 Zea mays Zm.19011.2.A1_a_at AY108328.1 decarboxylase family protein - 2e-3 At2g23320 WRKY15 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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