CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0281801

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os12g0281801 9634.m00143 - - 6e-1 At2g05510 glycine-rich protein S.X. H.G.
0.67 87.2 Os02g0506100 NM_186689.1 - - 7e+0 At5g35610 paired amphipathic helix repeat-containing protein S.X. H.G.
0.67 87.2 Os07g0471200 AK111455.1 - Hypothetical protein 2e-4 At2g23310 ATRER1C1 S.X. H.G.
0.57 77.0 Os04g0311700 9632.m02304 - - 3e+0 At3g52550 - S.X. H.G.
0.19 15.1 Os01g0499500 9630.m00867 - - 2e+0 At1g25425 CLE43 (CLAVATA3/ESR-RELATED 43) S.X. H.G.
0.16 11.3 Os08g0493450 9636.m03881 - - 4e-1 At5g49700 DNA-binding protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
98.8 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.6 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.7 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.78 0 967 Os06g0487800 AU082409 - - 4e-1 At2g05510 glycine-rich protein C.G. S.X.
0.29 0 912 Os06g0114300 BM421678 - Cyclin-like F-box domain containing protein 3e-1 At2g22410 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.27 4e-34 147 Os10g0381200 9638.m01990 - - 2e+0 At5g20110 dynein light chain, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 36 Arabidopsis thaliana At2g05510 815100 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA - - - C.G. S.X.
0.03 5e-2 40 Glycine max GmaAffx.15214.3.S1_at CA784587 - - 8e-1 At1g07135 glycine-rich protein C.G. S.X.
0.10 9e-20 97 Hordeum vulgare Contig18451_at Contig18451 - - 5e-2 At2g05510 glycine-rich protein C.G. S.X.
0.02 8e-1 36 Populus trichocarpa PtpAffx.72371.1.S1_at DN486279 hypothetical protein - 4e-1 At1g32337 unknown protein C.G. S.X.
0.13 3e-15 83 Triticum aestivum Ta.10760.1.S1_at BQ806324 - - 5e-1 At1g70310 SPDS2 (spermidine synthase 2) C.G. S.X.
0.03 2e-4 46 Vitis vinifera 1609110_at CF403304 hypothetical protein LOC100258605 - 2e-1 At3g28230 - C.G. S.X.
0.03 2e-2 40 Zea mays ZmAffx.799.1.A1_at AI770347 - - 5e-2 At1g75080 BZR1 (BRASSINAZOLE-RESISTANT 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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