Gene omics information

Query gene ID Os12g0260500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5777.0Os12g0260500AU184051-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g56860GNC (GATA, nitrate-inducible, carbon metabolism-involved)S.X.H.G.
0.4051.1Os01g0644900AK106910.1-Conserved hypothetical protein2e+0At1g02070unknown proteinS.X.H.G.
0.3541.7Os11g01797009639.m00715-Plant disease resistance response protein familyprotein2e-2At1g22900-S.X.H.G.
0.2625.6Os12g0135800AK061124.1--3e-3At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)S.X.H.G.
0.149.3Os11g0482200AK062443.1-Hypothetical protein3e-1At2g34585unknown proteinS.X.H.G.
0.084.2Os01g0591300AK101427.1-Cytosolic aldehyde dehydrogenase RF2D4e-6At3g24503ALDH2C4S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.499.9GSM195226RootGSE7951Genome-wide gene expression profiling of rice stigma
35.999.8GSM431927Root- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
35.599.8GSM431928Root- -Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
33.799.8GSM159179Root, 7-day-old Seedling, biological rep 3GSE6893Expression data for reproductive development in rice
28.599.6GSM302920root_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
21.599.2GSM159177Root, 7-day-old Seedling, biological rep 1GSE6893Expression data for reproductive development in rice
20.699.1GSM159178Root, 7-day-old Seedling, biological rep 2GSE6893Expression data for reproductive development in rice
10.298.0GSM116402Seedling_BAP treated_rep2GSE5167Rice seedling hormone treatment
9.998.0GSM116195Seedling_Control_rep1GSE5167Rice seedling hormone treatment
9.597.9GSM116398Seedling_Control_rep2GSE5167Rice seedling hormone treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.523e-134480Os07g06639009635.m04717-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g44450methyltransferaseC.G.S.X.
0.512e-110400Os07g0663800AK061856.1-Short-chain dehydrogenase/reductase SDR familyprotein2e-1At2g29340short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.503e-168593Os07g06640009635.m04718-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At1g14900HMGA (HIGH MOBILITY GROUP A)C.G.S.X.
0.137e-98359Os07g0664100NM_186063.1-Glucose/ribitol dehydrogenase family protein1e+0At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.056e-548Os07g0663500NM_186051.1-Short-chain dehydrogenase/reductase SDR familyprotein7e+0At5g39630vesicle transport v-SNARE family proteinC.G.S.X.
0.046e-548Os07g0663600AK107157.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-1At1g18280protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+032Arabidopsis thalianaAt5g56860835788GNC (GATA, nitrate-inducible, carbon metabolism-involved)F:transcription factor activity;P:glucose mediated signaling, regulation of nitrogen compound metabolic process;C:nucleus;FPOMB---C.G.S.X.
0.062e+032Glycine maxGmaAffx.81851.1.S1_atAW706751--2e+0At4g11870unknown proteinC.G.S.X.
0.098e-442Hordeum vulgareHVSMEf0013L02r2_atHVSMEf0013L02r2--1e+1At5g54067unknown proteinC.G.S.X.
0.092e+032Populus trichocarpaPtpAffx.41901.1.S1_atCK115521--6e+0At5g14510armadillo/beta-catenin repeat family proteinC.G.S.X.
0.105e-444Triticum aestivumTa.1339.1.S1_atBE425535--3e+0At5g62350invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)C.G.S.X.
0.042e+030Vitis vinifera1615382_s_atCB339280--2e-32At2g39450MTP11C.G.S.X.
0.083e+030Zea maysZm.6828.1.A1_atAI396546--2e-1At1g02710glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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