Gene omics information

Query gene ID Os12g0248300
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7793.1Os12g02483009640.m01408--7e-2At4g39260GR-RBP8S.X.H.G.
0.5371.3Os10g0427100AK120192.1-Conserved hypothetical protein3e-1At2g27740unknown proteinS.X.H.G.
0.5068.0Os01g0111300AK105004.2-Conserved hypothetical protein2e+0At5g10450GRF6 (G-box regulating factor 6)S.X.H.G.
0.4762.3Os07g0498300NM_187383.1--3e-14At4g20150unknown proteinS.X.H.G.
0.3236.3Os10g04169009638.m02375--1e+0At1g07950surfeit locus protein 5 family protein / SURF5 family proteinS.X.H.G.
0.2931.1Os04g04838009632.m03874--3e+0At5g12323unknown proteinS.X.H.G.
0.2117.9Os12g01470009640.m00437-Protein of unknown function DUF296 domaincontaining protein5e-1At4g00200DNA bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.799.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.799.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.099.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.999.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
26.699.5GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.199.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.099.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.899.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.199.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.399.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.141e-29131Os10g0476500AK110990.1-Conserved hypothetical protein1e-2At1g62240unknown proteinC.G.S.X.
0.131e-1481Os01g0339800AK111706.1-Hypothetical protein9e-4At3g59340unknown proteinC.G.S.X.
0.102e-1273Os06g02445009634.m01350--4e-1At5g38300unknown proteinC.G.S.X.
0.042e-344Os05g05619009633.m04562-Hypothetical protein6e-2At5g52830WRKY27C.G.S.X.
0.039e-961Os06g0502900AK103578.1-Hypothetical protein2e-11At3g07790DGCR14-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.057e-238Arabidopsis thalianaAt4g39260830082GR-RBP8Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).---C.G.S.X.
0.044e-136Glycine maxPsAffx.CL785Contig1_atPsAffx.CL785Contig1--1e+1At5g36920unknown proteinC.G.S.X.
0.031e-136Hordeum vulgareContig22082_atContig22082--5e+0At4g36515unknown proteinC.G.S.X.
0.051e-344Populus trichocarpaPtpAffx.50640.1.A1_atCV238485--1e+1At4g16140proline-rich family proteinC.G.S.X.
0.051e-654Triticum aestivumTaAffx.114551.1.S1_atCA632648--5e-4At3g07790DGCR14-relatedC.G.S.X.
0.042e-238Vitis vinifera1619140_atCF606031hypothetical protein LOC100246049-4e-4At2g35270DNA-binding protein-relatedC.G.S.X.
0.037e-340Zea maysZm.1757.1.S1_atBG841022R2R3MYB-domain protein-8e-3At2g16720MYB7 (MYB DOMAIN PROTEIN 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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