CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0227100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os12g0227100 9640.m01209 - - 1e+0 At1g01130 unknown protein S.X. H.G.
0.22 19.4 Os10g0130300 9638.m00311 - - 5e-1 At5g55570 unknown protein S.X. H.G.
0.14 9.3 Os04g0392800 9632.m03070 - - 6e-2 At4g16700 PSD1 (phosphatidylserine decarboxylase 1) S.X. H.G.
0.13 8.2 Os01g0760500 NM_191326.1 - - 2e-1 At3g23175 lesion inducing protein-related S.X. H.G.
0.11 6.5 Os02g0208800 9630.m01061 - - 3e+1 At5g27238 - S.X. H.G.
0.10 5.7 Os07g0418400 9635.m02244 - - 3e+0 At4g28460 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
151.0 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.8 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.2 99.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.1 98.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.8 98.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-7 57 Os01g0119700 9629.m00210 - - 8e-1 At3g22750 protein kinase, putative C.G. S.X.
0.10 4e-5 50 Os05g0420000 AK062325.1 - Hypothetical protein 6e+0 At5g24840 tRNA (guanine-N7-)-methyltransferase C.G. S.X.
0.06 1e-8 61 Os07g0226200 AK108016.1 - Conserved hypothetical protein 5e+0 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.05 4e-5 50 Os10g0172600 CB679764 - Hypothetical protein 4e-7 At2g14835 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At1g01130 839359 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 4e-1 36 Glycine max GmaAffx.77303.1.S1_at BI426984 - - 3e+0 At2g02835 - C.G. S.X.
0.03 6e-1 34 Hordeum vulgare Contig19066_at Contig19066 - - 4e-1 At5g47550 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.219182.1.S1_at pmrna35032 hypothetical protein - 5e-2 At1g26780 myb family transcription factor (MYB117) C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.28426.1.S1_at CA660337 - - 3e+1 At5g50090 unknown protein C.G. S.X.
0.03 9e-2 36 Vitis vinifera 1618644_at CD005517 - - 1e-40 At5g57440 GS1 C.G. S.X.
0.04 5e-1 34 Zea mays Zm.6972.1.A1_at AI065883 - - 8e+0 At3g23830 GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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