CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0221600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os12g0221600 AK062469.1 - Hypothetical protein 1e+0 At5g43570 serine-type endopeptidase inhibitor S.X. H.G.
0.77 93.1 Os12g0218300 AK063060.1 - Hypothetical protein 3e-1 At3g48208 - S.X. H.G.
0.71 89.6 Os12g0218800 AK107720.1 - Hypothetical protein 2e-5 At3g50550 unknown protein S.X. H.G.
0.53 71.3 Os11g0160400 AK109030.1 - Hypothetical protein 4e-2 At3g53650 histone H2B, putative S.X. H.G.
0.53 71.3 Os01g0940800 AK068247.1 - Beta-1,3-glucanase precursor 1e-5 At5g20560 beta-1,3-glucanase, putative S.X. H.G.
0.50 68.0 Os06g0493100 AY256682.1 - Hypothetical protein 1e+0 At5g38950 germin-like protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
137.2 100.0 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
69.1 99.9 GSM262021 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
31.1 99.7 GSM262016 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
24.6 99.4 GSM262017 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
15.9 98.7 GSM262012 Nipponbare, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.2 98.5 GSM262018 Nipponbare, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.9 98.4 GSM262019 Nipponbare, 11 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.9 98.4 GSM262013 Nipponbare, 2 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.4 98.1 GSM262014 Nipponbare, 4 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.1 96.6 GSM262010 Nipponbare, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.59 4e-33 143 Os12g0218300 AK063060.1 - Hypothetical protein 3e-1 At3g48208 - C.G. S.X.
0.06 1e-8 61 Os05g0129400 AK102359.1 - Ankyrin repeat containing protein 2e+0 At4g33800 unknown protein C.G. S.X.
0.05 3e-9 63 Os07g0125000 AK060005.1 - Pathogenesis-related protein PR-1 precursor 1e-4 At3g09590 pathogenesis-related protein, putative C.G. S.X.
0.05 4e-8 59 Os04g0284500 AK119323.1 - Hypothetical protein 2e+0 At2g01540 C2 domain-containing protein C.G. S.X.
0.04 2e-13 77 Os06g0148700 AK064526.1 - Cyclin-like F-box domain containing protein 7e-1 At1g56060 unknown protein C.G. S.X.
0.04 2e-10 67 Os01g0865100 AK071410.1 - Uricase (Fragment) 4e-5 At2g26230 uricase / urate oxidase / nodulin 35, putative C.G. S.X.
0.04 1e-8 61 Os02g0121600 AK105698.1 - Hypothetical protein 4e+0 At1g53530 signal peptidase I family protein C.G. S.X.
0.03 5e-14 79 Os09g0371100 9637.m01750 - - 6e-2 At1g78130 UNE2 (unfertilized embryo sac 2) C.G. S.X.
0.03 4e-8 59 Os09g0511900 AK066336.1 - Glycoside hydrolase, family 1 protein 1e-2 At1g02850 BGLU11 (BETA GLUCOSIDASE 11) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At5g43570 834377 serine-type endopeptidase inhibitor Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. - - - C.G. S.X.
0.03 5e-1 36 Glycine max HgAffx.17586.1.S1_at CB278804 - - 1e-2 At5g43570 serine-type endopeptidase inhibitor C.G. S.X.
0.04 6e-1 34 Hordeum vulgare HM09B17r_at HM09B17r - - 5e+0 At5g62750 unknown protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.69509.1.A1_at CV254759 - - 3e+0 At5g57565 protein kinase family protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.58503.1.S1_at CA619058 - - 4e+0 At5g03660 unknown protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1610534_at CF372174 hypothetical protein LOC100265926 - 2e-1 At5g49470 protein kinase family protein C.G. S.X.
0.03 6e-1 34 Zea mays ZmAffx.821.1.A1_at AI770497 - - 3e+0 At3g21840 ASK7 (ARABIDOPSIS SKP1-LIKE 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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