CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0193100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os12g0193100 AK068584.1 - Subtilisin inhibitor I (ASI-I) [Contains:Subtilisin inhibitor II (ASI-II)] 6e-1 At3g61840 unknown protein S.X. H.G.
0.50 68.0 Os04g0278900 AK108886.1 - Dihydrouridine synthase, DuS family protein 2e-3 At3g63510 FAD binding / catalytic/ tRNA dihydrouridine synthase S.X. H.G.
0.43 55.4 Os04g0534300 AK065842.1 - Ubiquitin interacting motif domain containingprotein 6e-1 At3g50550 unknown protein S.X. H.G.
0.40 51.1 Os05g0580900 AK108609.1 - Conserved hypothetical protein 6e-14 At2g27200 GTP-binding family protein S.X. H.G.
0.36 44.0 Os09g0248000 AK120327.1 - Conserved hypothetical protein 1e-7 At2g03800 GEK1 (GEKO1) S.X. H.G.
0.17 12.6 Os07g0618500 AK068975.1 - Folate synthesis protein precursor [INCLUDES:2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase (EC 2.7.6.3) (HPPK) 7e-6 At1g53450 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.7 98.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.0 97.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.9 97.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2 97.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.0 97.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.9 97.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-3 48 Os05g0446300 AK066998.1 - G10 protein homolog 2e-12 At4g21110 G10 family protein C.G. S.X.
0.02 2e-2 44 Os12g0403800 AK064189.1 - 3' exoribonuclease domain containing protein 5e-2 At3g07750 3' exoribonuclease family domain 1-containing protein C.G. S.X.
0.01 2e-5 54 Os01g0965600 AK073409.1 - Conserved hypothetical protein 3e+0 At3g20760 - C.G. S.X.
0.01 1e-3 48 Os09g0436400 AK102877.1 - PDZ/DHR/GLGF domain containing protein 6e-2 At1g46408 AGL97 (AGAMOUS-LIKE 97) C.G. S.X.
0.01 2e-2 44 Os03g0707300 AK066944.1 - Conserved hypothetical protein 5e+0 At5g23510 unknown protein C.G. S.X.
0.01 2e-2 44 Os08g0224200 AK101331.1 - YTH domain protein 2 (High-glucose-regulatedprotein 8) (NY-REN-2 antigen) (CLL-associated antigenKW-14). Splice isoform 2 1e-21 At3g13060 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e-1 38 Arabidopsis thaliana At3g61840 825357 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 9e-1 38 Glycine max PsAffx.C208000028_at PsAffx.C208000028 - - 3e-1 At1g14686 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.20 2e-104 381 Hordeum vulgare Contig7456_s_at Contig7456 - - 3e+0 At3g15640 cytochrome c oxidase family protein C.G. S.X.
0.01 4e+0 36 Populus trichocarpa PtpAffx.221512.1.S1_at pmrna38434 hypothetical protein - 1e-16 At1g55170 unknown protein C.G. S.X.
0.19 2e-59 232 Triticum aestivum Ta.8340.1.S1_at CD938065 - - 2e-1 At5g57567 unknown protein C.G. S.X.
0.01 2e-1 38 Vitis vinifera 1616805_s_at CB969852 hypothetical protein LOC100253153 - 1e-11 At1g55170 unknown protein C.G. S.X.
0.01 7e-2 40 Zea mays Zm.10521.1.S1_at CO524372 myosin-like protein - 1e+1 At5g56150 UBC30 (ubiquitin-conjugating enzyme 30) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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