CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0186700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 99.2 Os12g0186700 9640.m00793 - Conserved hypothetical protein 3e+0 At4g28815 transcription regulator S.X. H.G.
0.33 38.8 Os12g0245100 AK065859.1 - Hypothetical protein 1e-2 At2g37590 Dof-type zinc finger domain-containing protein S.X. H.G.
0.27 27.5 Os08g0502600 AK107730.1 - Calcium-binding EF-hand domain containing protein 4e+0 At3g50770 calmodulin-related protein, putative S.X. H.G.
0.23 21.2 Os06g0151700 AK106925.1 - - 1e-2 At3g55950 CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3) S.X. H.G.
0.06 3.0 Os06g0594300 AK110986.1 - Conserved hypothetical protein 8e-1 At5g30341 unknown protein S.X. H.G.
0.04 2.0 Os02g0100700 AK070106.1 - Integrins alpha chain family protein 1e-12 At3g51050 FG-GAP repeat-containing protein S.X. H.G.
0.02 1.0 Os06g0263400 9634.m01526 - Naringenin-chalcone synthase family protein 1e-2 At2g26640 KCS11 (3-KETOACYL-COA SYNTHASE 11) S.X. H.G.
0.02 1.0 Os04g0634000 AK106486.1 - S-locus glycoprotein family protein 1e-3 At1g24650 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
83.9 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.9 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.4 99.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.7 98.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.9 98.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.9 98.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.0 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 2e-77 291 Os11g0459000 9639.m02425 - - 7e-1 At1g32200 ATS1 C.G. S.X.
0.26 8e-89 329 Os05g0264100 9633.m01613 - - 3e+0 At3g03870 unknown protein C.G. S.X.
0.26 2e-83 311 Os11g0309300 9639.m01916 - - 9e-1 At3g24040 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.23 3e-85 317 Os07g0264300 9635.m01603 - - 9e-1 At5g19880 peroxidase, putative C.G. S.X.
0.09 2e-89 331 Os08g0378000 AK067437.1 - Conserved hypothetical protein 6e-1 At4g27810 unknown protein C.G. S.X.
0.09 2e-86 321 Os11g0269700 AK071998.1 - Conserved hypothetical protein 2e+0 At2g47670 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e+0 34 Arabidopsis thaliana At4g28815 5008171 transcription regulator F:transcription regulator activity;P:regulation of transcription;C:endomembrane system, nucleus;PMFO - - - C.G. S.X.
0.02 3e-1 38 Glycine max Gma.13116.1.S1_at CD391675 - - 2e-2 At2g05320 beta-1,2-N-acetylglucosaminyltransferase II C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HVSMEb0017B20r2_at HVSMEb0017B20r2 - - 3e-4 At2g41870 remorin family protein C.G. S.X.
0.02 3e-1 38 Populus trichocarpa Ptp.1368.1.A1_a_at CV255476 hypothetical protein - 1e-23 At3g46740 TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III) C.G. S.X.
0.02 9e-1 36 Triticum aestivum TaAffx.119313.2.S1_at CA654698 - - 4e+0 At1g53560 unknown protein C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1609661_at CF215628 - - 2e-1 At3g26934 unknown protein C.G. S.X.
0.02 1e+0 34 Zea mays Zm.1110.1.A1_at CO525680 hypothetical protein LOC100193515 - 6e+0 At4g10910 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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