CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0160500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os12g0160500 AK120844.1 - Homeobox domain containing protein 5e-31 At2g35940 BLH1 (BEL1-LIKE HOMEODOMAIN 1) S.X. H.G.
0.56 76.3 Os10g0127900 AK104771.1 - Conserved hypothetical protein 1e-1 At1g76980 - S.X. H.G.
0.49 64.4 Os05g0516100 AK107721.1 - Conserved hypothetical protein 3e-1 At5g44570 unknown protein S.X. H.G.
0.46 60.9 Os08g0524800 AK099291.1 - TA1 protein (Fragment) 4e-6 At4g34530 CIB1 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1) S.X. H.G.
0.44 58.1 Os01g0889900 AK099945.1 - S-locus glycoprotein family protein 1e-3 At1g34300 lectin protein kinase family protein S.X. H.G.
0.43 55.4 Os12g0268000 AK071599.1 - Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1)(ARP-2) 2e-1 At5g67310 CYP81G1 S.X. H.G.
0.42 53.9 Os01g0194300 AY323485.1 - NPR1-like protein 1e-3 At1g64280 NPR1 (NONEXPRESSER OF PR GENES 1) S.X. H.G.
0.40 51.1 Os04g0457500 AU075570 - Gamma-glutamyltranspeptidase family protein 7e+0 At4g12380 unknown protein S.X. H.G.
0.39 48.3 Os02g0800500 AK067815.1 - NADH-ubiquinone oxidoreductase 39 kDa subunit,mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)(Complex I-39KD) (CI-39KD) 1e-10 At2g20360 binding / catalytic/ coenzyme binding S.X. H.G.
0.39 48.3 Os04g0573900 AK061650.1 - Cytochrome P450-like protein 4e+0 At3g48520 CYP94B3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
56.0 99.9 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
42.3 99.9 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
42.0 99.9 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
41.3 99.9 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
33.0 99.8 GSM304654 Mutant stable line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
24.1 99.4 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.5 99.4 GSM304669 Control for the stable mutant rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
16.7 98.8 GSM304664 Control for the stable mutant rice line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
6.6 97.3 GSM195221 Ovary 1, biological rep 1 GSE7951 Genome-wide gene expression profiling of rice stigma
6.5 97.2 GSM195223 Ovary 3, biological rep 3 GSE7951 Genome-wide gene expression profiling of rice stigma
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 5e-23 111 Os11g0158700 9639.m00528 - POX domain containing protein 1e-1 At2g35940 BLH1 (BEL1-LIKE HOMEODOMAIN 1) C.G. S.X.
0.13 1e-29 133 Os03g0165300 AK099829.1 - Homeodomain-containing protein 2e-15 At2g16400 BLH7 (bell1-like homeodomain 7) C.G. S.X.
0.07 5e-26 121 Os10g0534900 AK068029.1 - Homothorax protein (Fragment) 8e-2 At2g23760 BLH4 (BEL1-LIKE HOMEODOMAIN 4) C.G. S.X.
0.05 8e-25 117 Os03g0124000 AK121207.1 - Homeobox domain containing protein 2e-5 At4g36870 BLH2 (BEL1-LIKE HOMEODOMAIN 2) C.G. S.X.
0.04 8e-25 117 Os03g0124100 AK107007.1 - Protein of unknown function DUF604 family protein 4e-6 At1g07850 transferase, transferring glycosyl groups C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 5e-31 137 Arabidopsis thaliana At2g35940 818167 BLH1 (BEL1-LIKE HOMEODOMAIN 1) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. - - - C.G. S.X.
0.08 5e-16 87 Glycine max GmaAffx.60479.1.S1_at BG726023 - - 3e-25 At2g35940 BLH1 (BEL1-LIKE HOMEODOMAIN 1) C.G. S.X.
0.08 1e-8 61 Hordeum vulgare Contig18571_at Contig18571 - - 8e-8 At4g36870 BLH2 (BEL1-LIKE HOMEODOMAIN 2) C.G. S.X.
0.06 4e-20 101 Populus trichocarpa PtpAffx.19246.1.S1_at CV245825 hypothetical protein - 2e-32 At2g35940 BLH1 (BEL1-LIKE HOMEODOMAIN 1) C.G. S.X.
0.12 9e-11 69 Triticum aestivum TaAffx.54189.1.S1_at CA684684 - - 4e-3 At1g19700 BEL10 (BEL1-LIKE HOMEODOMAIN 10) C.G. S.X.
0.08 4e-10 65 Vitis vinifera 1620622_at CD718777 - - 2e-11 At2g16400 BLH7 (bell1-like homeodomain 7) C.G. S.X.
0.06 6e-10 65 Zea mays Zm.10313.1.S1_at AY082396.1 knotted1-interacting protein - 2e-7 At2g16400 BLH7 (bell1-like homeodomain 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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