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| Query gene ID | Os12g0139300 |
| Gene name | |
| Organism | Oryza sativa |
| VF | %ile | Gene/Probe ID | Repr.ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | S.X. | H.G. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 94.6 | Os12g0139300 | AK060257.1 | - | E-class P450, group I family protein | 1e-6 | At5g05690 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | S.X. | H.G. | |
| 0.30 | 32.7 | Os02g0733800 | AK121645.1 | - | Nuclear protein SET domain containing protein | 3e-16 | At1g24610 | SET domain-containing protein | S.X. | H.G. | |
| 0.16 | 11.3 | Os03g0762700 | CB623311 | - | Conserved hypothetical protein | 2e+0 | At5g67410 | unknown protein | S.X. | H.G. | |
| 0.09 | 4.9 | Os09g0421500 | AK070023.1 | - | Conserved hypothetical protein | 3e-3 | At2g23320 | WRKY15 | S.X. | H.G. | |
| 0.05 | 2.5 | Os10g0480500 | AK066524.1 | - | Double-stranded RNA binding domain containingprotein | 5e-3 | At2g28380 | DRB2 (DSRNA-BINDING PROTEIN 2) | S.X. | H.G. | |
| 0.04 | 2.0 | Os02g0606000 | AK058232.1 | - | - | 3e+0 | At2g02515 | unknown protein | S.X. | H.G. | |
| 0.04 | 2.0 | Os10g0437000 | CB657474 | - | Glycosyl transferase, family 14 protein | 1e-5 | At3g03690 | UNE7 (unfertilized embryo sac 7) | S.X. | H.G. | |
| 0.03 | 1.4 | Os08g0128300 | AK103383.1 | - | - | 1e-9 | At1g13180 | DIS1 (DISTORTED TRICHOMES 1) | S.X. | H.G. | |
| 0.01 | 0.5 | Os02g0819100 | AK100156.1 | - | Zn-finger, DHHC type domain containing protein | 7e-7 | At3g09320 | zinc finger (DHHC type) family protein | S.X. | H.G. |
| Std2 GX | %ile | GSM ID | Assay Name | GSE ID | Experiment Title |
|---|---|---|---|---|---|
| 11.9 | 98.3 | GSM302919 | leaf_rep2 | GSE11966 | Expression data from rice embryo,endosperm,root,leaf and seedling |
| 10.3 | 98.1 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa |
| 9.5 | 97.9 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa |
| 9.5 | 97.9 | GSM278846 | WuYun3-RSV infected, biological rep3 | GSE11025 | Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection |
| 9.5 | 97.9 | GSM278854 | KT95-418-non-infected, biological rep2 | GSE11025 | Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection |
| 8.3 | 97.7 | GSM302918 | leaf_rep1 | GSE11966 | Expression data from rice embryo,endosperm,root,leaf and seedling |
| 8.0 | 97.6 | GSM278847 | WuYun3-non-infected, biological rep1 | GSE11025 | Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection |
| 7.6 | 97.5 | GSM375765 | gid1-3_ shoot_replicate 1 | GSE15046 | Transcriptome analysis of gibberellin-signaling mutants in rice |
| 7.4 | 97.5 | GSM375767 | gid1-3_ shoot_replicate 3 | GSE15046 | Transcriptome analysis of gibberellin-signaling mutants in rice |
| 7.0 | 97.4 | GSM375766 | gid1-3_ shoot_replicate 2 | GSE15046 | Transcriptome analysis of gibberellin-signaling mutants in rice |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional description | Ev | AGI code | Arabidopsis gene name | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.02 | 5e-4 | 48 | Os01g0196500 | NM_188246.1 | - | Prenylated rab acceptor PRA1 family protein | 2e+0 | At1g75000 | GNS1/SUR4 membrane family protein | C.G. | S.X. | |
| 0.02 | 7e-3 | 44 | Os10g0562600 | 9638.m03763 | - | - | 3e-2 | At3g10040 | transcription factor | C.G. | S.X. | |
| 0.02 | 1e-1 | 40 | Os09g0478600 | AK109529.1 | - | The start codon is not identified. | 5e+0 | At3g06890 | unknown protein | C.G. | S.X. | |
| 0.01 | 3e-2 | 42 | Os03g0284900 | AK068146.1 | - | Protein prenyltransferase domain containingprotein | 6e-3 | At5g02830 | pentatricopeptide (PPR) repeat-containing protein | C.G. | S.X. | |
| 0.01 | 1e-1 | 40 | Os04g0506300 | AK063591.1 | - | TMS membrane protein/tumour differentiallyexpressed protein family protein | 3e+0 | At2g33205 | - | C.G. | S.X. |
| HF | Ev | BS | Species | Gene ID | Repr. ID | Gene Name | Functional description | Ev | AGI code | Arabidopsis gene name | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.11 | 1e-6 | 56 | Arabidopsis thaliana | At5g05690 | 830453 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses. | - | - | - | C.G. | S.X. | |
| 0.07 | 1e-13 | 79 | Glycine max | GmaAffx.74065.1.S1_at | BQ295944 | - | - | 7e-27 | At5g05690 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | C.G. | S.X. | |
| 0.20 | 9e-58 | 224 | Hordeum vulgare | Contig20267_at | Contig20267 | - | - | 4e+0 | At5g42070 | unknown protein | C.G. | S.X. | |
| 0.09 | 3e-1 | 38 | Populus trichocarpa | PtpAffx.79902.1.S1_at | CV241105 | cytochrome P450 probable 6-deoxocathasterone to 6-deoxoteasterone or cathasterone to teasterone | - | 2e-15 | At5g05690 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | C.G. | S.X. | |
| 0.53 | 3e-161 | 569 | Triticum aestivum | Ta.4986.1.S1_at | CK160160 | - | - | 5e-8 | At5g05690 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | C.G. | S.X. | |
| 0.08 | 5e-9 | 61 | Vitis vinifera | 1609099_at | CD005725 | hypothetical protein LOC100258692 | - | 9e-6 | At5g05690 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | C.G. | S.X. | |
| 0.39 | 6e-74 | 278 | Zea mays | Zm.2464.1.S1_at | AY108287.1 | hypothetical protein LOC100272666 | - | 3e-3 | At5g05690 | CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) | C.G. | S.X. |
| ECC | GO ID | Process Name |
|---|---|---|
| L | GO:0006412 | The cellular metabolic process by which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
| L | GO:0006869 | The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. |
| L | GO:0015671 | The directed movement of oxygen (O2) into, out of, within or between cells. |
| L | GO:0022900 | A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
| L | GO:0042157 | The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids. |
| KaPPA-View ID | Link to Kappa-View | Pathway Name |
|---|
| KEGG PATHWAY ID | Link to KEGG PATHWAY | Pathway Name |
|---|
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