CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0129000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os12g0129000 9640.m00264 - Eukaryotic protein of unknown function DUF872family protein 3e-1 At5g65350 histone H3 S.X. H.G.
0.73 91.1 Os07g0610400 9635.m04199 - - 6e+0 At4g25890 60S acidic ribosomal protein P3 (RPP3A) S.X. H.G.
0.60 79.7 Os08g0543100 9636.m04377 - Disease resistance protein family protein 1e-1 At2g07340 prefoldin-related KE2 family protein S.X. H.G.
0.57 77.0 Os02g0704800 BM420590 - Ornithine carbamoyltransferase OOCT1 (EC 2.1.3.3) 2e+0 At1g52680 late embryogenesis abundant protein-related / LEA protein-related S.X. H.G.
0.42 53.9 Os08g0129400 9636.m00269 - - 4e+0 At1g22520 unknown protein S.X. H.G.
0.33 38.8 Os04g0380200 AK104769.1 - Conserved hypothetical protein 1e-1 At3g27210 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
180.2 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.7 97.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
2.8 94.3 GSM262002 IAC165, 4 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.5 93.6 GSM262000 IAC165, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.3 93.0 GSM262009 IAC165, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.3 93.0 GSM262019 Nipponbare, 11 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.3 93.0 GSM262008 IAC165, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.3 93.0 GSM262001 IAC165, 2 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.2 92.7 GSM262021 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.2 92.7 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 3e-141 502 Os11g0132400 AK059074.1 - Hypothetical protein 2e+0 At3g29170 unknown protein C.G. S.X.
0.10 2e-7 57 Os08g0564900 AK120585.1 - Hypothetical protein 8e-1 At5g47030 ATP synthase delta' chain, mitochondrial C.G. S.X.
0.06 1e-5 52 Os09g0357300 AK103726.1 - - 1e+0 At4g29120 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein C.G. S.X.
0.04 2e-3 44 Os06g0334700 9634.m02245 - Hypothetical protein 1e+0 At4g25845 unknown protein C.G. S.X.
0.03 2e-3 44 Os05g0145900 AK121187.1 - Conserved hypothetical protein 4e-1 At5g42765 - C.G. S.X.
0.02 6e-4 46 Os06g0334600 AK064993.1 - Hypothetical protein 1e+0 At3g15780 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 36 Arabidopsis thaliana At5g65350 836660 histone H3 F:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MFPO - - - C.G. S.X.
0.04 2e+0 34 Glycine max GmaAffx.84530.1.S1_at BU090645 - - 3e+0 At5g02930 F-box family protein C.G. S.X.
0.28 1e-51 202 Hordeum vulgare Contig10319_at Contig10319 - - 2e-3 At3g29170 unknown protein C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.90814.1.S1_at CK090584 hypothetical protein - 4e-10 At2g32410 AXL (AXR1-LIKE) C.G. S.X.
0.23 8e-42 171 Triticum aestivum TaAffx.16699.1.S1_at CA598905 - - 3e-2 At3g29170 unknown protein C.G. S.X.
0.05 1e+0 32 Vitis vinifera 1616611_at CF404283 - - 2e-1 At2g33220 - C.G. S.X.
0.04 1e-1 36 Zea mays Zm.7621.2.S1_at BE056959 Hypothetical protein LOC100193790 - 1e-1 At5g26070 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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