CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0115700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os12g0115700 AK099443.1 - Chalcone-flavanone isomerase family protein 3e+0 At4g04745 unknown protein S.X. H.G.
0.71 89.6 Os07g0510500 AK068586.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 4e-3 At3g21800 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) S.X. H.G.
0.60 79.7 Os06g0288200 AK071127.1 - Hypothetical protein 8e-1 At2g47400 CP12-1 S.X. H.G.
0.60 79.7 Os06g0102100 AK099468.1 - Cytochrome P450 family protein 1e+0 At5g46020 unknown protein S.X. H.G.
0.55 73.7 Os07g0687100 AK062162.1 - Protein of unknown function DUF341 family protein 9e-3 At4g24380 unknown protein S.X. H.G.
0.44 58.1 Os04g0454200 AK072059.1 - Monosaccharide transporter 1 6e-2 At1g34580 monosaccharide transporter, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.7 98.4 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.3 98.3 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.2 98.3 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.8 98.3 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.3 98.2 GSM421721 MOCK, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.2 98.2 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.2 98.2 GSM421679 XOC, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.0 98.2 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.7 98.1 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.5 98.1 GSM421723 MOCK, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-2 40 Os12g0438400 AK068449.1 - Hypothetical protein 2e+0 At5g63480 unknown protein C.G. S.X.
0.02 3e-1 38 Os06g0653100 9634.m04290 - Senescence-associated protein 5 2e-9 At4g28050 TET7 (TETRASPANIN7) C.G. S.X.
0.01 8e-2 40 Os03g0365800 AK063672.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g28640 GDSL-motif lipase, putative C.G. S.X.
0.01 3e-1 38 Os01g0109700 CA762885 - Paired amphipathic helix repeat containing protein 9e-19 At1g24190 SNL3 (SIN3-LIKE 3) C.G. S.X.
0.01 3e-1 38 Os02g0609500 AK106881.1 - Hypothetical protein 1e+1 At5g38090 unknown protein C.G. S.X.
0.01 3e-1 38 Os03g0302200 AK120853.1 - Zn-finger-like, PHD finger domain containingprotein 3e-14 At3g05670 PHD finger family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At4g04745 825810 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e-1 38 Glycine max PsAffx.C99000036_at PsAffx.C99000036 - - 7e-2 At5g19190 unknown protein C.G. S.X.
0.26 4e-19 95 Hordeum vulgare Contig6242_at Contig6242 - - 8e-3 At5g05270 chalcone-flavanone isomerase family protein C.G. S.X.
0.06 6e-8 59 Populus trichocarpa PtpAffx.932.2.A1_at CV268183 chalcone isomerase-like protein - 7e-3 At5g05270 chalcone-flavanone isomerase family protein C.G. S.X.
0.04 7e-4 46 Triticum aestivum Ta.17171.1.S1_at CA618472 - - 4e+0 At5g05270 chalcone-flavanone isomerase family protein C.G. S.X.
0.07 5e-11 67 Vitis vinifera 1620424_at CB349003 hypothetical protein LOC100255217 - 2e-3 At5g05270 chalcone-flavanone isomerase family protein C.G. S.X.
0.16 1e-15 83 Zea mays Zm.4213.1.A1_at BG841480 IDP158 protein /// chalcone--flavonone isomerase /// chalcone--flavonone isomerase - 1e-5 At5g05270 chalcone-flavanone isomerase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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