Gene omics information

Query gene ID Os12g0103300
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os12g0103300AU222596-Protein transport protein SEC61 beta subunit4e-3At5g60460sec61beta family proteinS.X.H.G.
0.5068.0Os09g0541500AK060244.1-Longin-like domain containing protein3e-29At2g20930-S.X.H.G.
0.2727.5Os05g0474400AK060006.1--6e-1At3g56110PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1)S.X.H.G.
0.1712.6Os08g0248900AK073613.1-ADP-ribosylation factor 32e-46At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)S.X.H.G.
0.1712.6Os12g0207300AF443601.1-Clathrin coat assembly protein AP17 (Clathrin coatassociated protein AP17) (Plasma membrane adaptor AP-2 17kDa protein) (HA2 17 kDa subunit) (Clathrin assemblyprotein 2 small chain)9e-55At1g47830clathrin coat assembly protein, putativeS.X.H.G.
0.116.5Os11g0181100AK100605.1-Nonaspanin (TM9SF) family protein2e-70At1g10950endomembrane protein 70, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.095.9GSM4094309311_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.995.8GSM429984Rice wild-type panicle rep2GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
3.795.6GSM159192Inflorescence (P2, 3 - 5 cm), biological rep 1GSE6893Expression data for reproductive development in rice
3.695.5GSM159201Inflorescence (P5, 15 - 22 cm), biological rep 1GSE6893Expression data for reproductive development in rice
3.395.1GSM159202Inflorescence (P5, 15 - 22 cm), biological rep 2GSE6893Expression data for reproductive development in rice
3.395.1GSM159199Inflorescence (P4, 10 - 15 cm), biological rep 2GSE6893Expression data for reproductive development in rice
3.395.1GSM429982Rice wild-type panicle rep1GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
3.294.9GSM359907FL478 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
3.294.9GSM359914IR63731 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
3.094.6GSM159200Inflorescence (P4, 10 - 15 cm), biological rep 3GSE6893Expression data for reproductive development in rice
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-138Os06g05531009634.m03406-Heat shock transcription factor 29 (Fragment)1e-10At3g22830AT-HSFA6BC.G.S.X.
0.045e-446Os02g04803009630.m02652--2e+0At4g33000CBL10 (CALCINEURIN B-LIKE 10)C.G.S.X.
0.028e-342Os02g0216600AK064515.1-Hypothetical protein3e+0At2g30933-C.G.S.X.
0.021e-138Os03g0323800AK105342.1-Porin, eukaryotic type family protein4e-9At3g20000TOM40C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.164e-342Arabidopsis thalianaAt5g60460836167sec61beta family proteinF:protein transporter activity;P:protein transport;C:plasma membrane;MFPOB---C.G.S.X.
0.122e-1169Glycine maxGma.5350.1.S1_s_atAW351218--6e-18At5g60460sec61beta family proteinC.G.S.X.
0.371e-50198Hordeum vulgareContig5465_atContig5465--2e-4At5g60460sec61beta family proteinC.G.S.X.
0.159e-548Populus trichocarpaPtpAffx.18075.1.S1_atCV278430--2e-12At5g60460sec61beta family proteinC.G.S.X.
0.241e-58226Triticum aestivumTa.13162.1.S1_atCK200289--5e-4At5g60460sec61beta family proteinC.G.S.X.
0.165e-1269Vitis vinifera1620903_atCF605711hypothetical protein LOC100260422-2e-12At5g60460sec61beta family proteinC.G.S.X.
0.271e-50198Zea maysZm.16986.1.S1_atCF632581protein transport protein Sec61 beta subunit-2e-2At5g60460sec61beta family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage