CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0103000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.47 62.3 Os12g0103000 AK068622.1 - Mitochondrial substrate carrier family protein 3e-16 At2g35800 mitochondrial substrate carrier family protein S.X. H.G.
0.55 73.7 Os06g0729800 9634.m04999 - Isopentenyl transferase-like domain containingprotein 3e-3 At5g20040 ATIPT9 S.X. H.G.
0.44 58.1 Os12g0193100 AK068584.1 - Subtilisin inhibitor I (ASI-I) [Contains:Subtilisin inhibitor II (ASI-II)] 6e-1 At3g61840 unknown protein S.X. H.G.
0.44 58.1 Os04g0278900 AK108886.1 - Dihydrouridine synthase, DuS family protein 2e-3 At3g63510 FAD binding / catalytic/ tRNA dihydrouridine synthase S.X. H.G.
0.33 38.8 Os09g0248000 AK120327.1 - Conserved hypothetical protein 1e-7 At2g03800 GEK1 (GEKO1) S.X. H.G.
0.31 34.5 Os07g0673700 AK071934.1 - Cyclin-like F-box domain containing protein 4e+0 At3g43583 unknown protein S.X. H.G.
0.31 34.5 Os04g0577500 AK065648.1 - TatD-related deoxyribonuclease family protein 2e-4 At5g17570 tatD-related deoxyribonuclease family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.0 98.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.4 97.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.5 97.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.9 97.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.8 97.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.9 96.5 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
4.3 96.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.1 96.0 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
4.0 95.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.0 95.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 38 Os05g0337500 CB640460 - Conserved hypothetical protein 3e-1 At1g63310 - C.G. S.X.
0.01 4e-2 42 Os08g0322400 AK120116.1 - Conserved hypothetical protein 4e-1 At1g76980 - C.G. S.X.
0.01 1e-1 40 Os05g0353600 9633.m02609 - Glutaredoxin domain containing protein 6e+0 At2g37000 TCP family transcription factor, putative C.G. S.X.
0.01 1e-1 40 Os12g0541000 9640.m03442 - Lumazine-binding protein family protein 2e+0 At5g54530 unknown protein C.G. S.X.
0.01 5e-1 38 Os02g0525600 AK060671.1 - Conserved hypothetical protein 2e-1 At1g01490 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 5e-1 38 Os04g0502000 9632.m04042 - - 6e-3 At1g68870 unknown protein C.G. S.X.
0.01 5e-1 38 Os06g0651300 AK073865.1 - Zn-finger, U1-like domain containing protein 3e-1 At5g27710 unknown protein C.G. S.X.
0.01 5e-1 38 Os07g0509800 AU100738 - PAPS-reductase-like protein precursor 1e+0 At4g04610 APR1 (APS REDUCTASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 3e-16 87 Arabidopsis thaliana At2g35800 818153 mitochondrial substrate carrier family protein F:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, chloroplast envelope;MFPO - - - C.G. S.X.
0.18 2e-12 75 Glycine max Gma.7376.2.S1_at BI469744 - - 4e-63 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
0.31 2e-173 609 Hordeum vulgare Contig25159_at Contig25159 - - 8e-12 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
0.24 5e-19 97 Populus trichocarpa Ptp.5963.1.S1_at CV229887 - - 4e-26 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
0.38 5e-160 565 Triticum aestivum Ta.4635.1.A1_at BJ274050 - - 5e-14 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
0.06 3e-17 89 Vitis vinifera 1621824_at CD011778 - - 4e-7 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
0.17 1e-56 220 Zea mays Zm.4496.1.A1_at AY112137.1 hypothetical protein LOC100275632 - 9e-2 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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