CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0102600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.4 Os12g0102600 AK072365.1 - TPR-like domain containing protein 2e-2 At1g30475 - S.X. H.G.
0.58 77.0 Os01g0734600 AK103129.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-3 At1g70470 unknown protein S.X. H.G.
0.55 73.7 Os08g0101700 AK061172.1 - Cytochrome b561 1e-1 At1g13930 - S.X. H.G.
0.53 71.3 Os04g0507100 AK066402.1 - Conserved hypothetical protein 3e-3 At4g28740 - S.X. H.G.
0.47 62.3 Os10g0530500 AF402800.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At3g09270 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8) S.X. H.G.
0.39 48.3 Os07g0196200 AK070765.1 - Conserved hypothetical protein 1e-1 At4g23890 unknown protein S.X. H.G.
0.36 44.0 Os11g0621400 AK062468.1 - Hypothetical protein 1e+0 At4g34290 SWIB complex BAF60b domain-containing protein S.X. H.G.
0.27 27.5 Os04g0657300 CB624212 - Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1) 2e-1 At1g68552 CPuORF53 (Conserved peptide upstream open reading frame 53) S.X. H.G.
0.24 22.4 Os02g0556800 AK100187.1 - Conserved hypothetical protein 3e-2 At1g04445 zinc finger (C2H2 type) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.0 98.7 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.3 98.7 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.1 98.3 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.3 98.2 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.3 98.2 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.7 98.1 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.3 98.1 GSM421700 XOO, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.7 98.0 GSM421680 XOC, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.0 97.8 GSM421679 XOC, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.7 97.8 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 1e-35 153 Os10g0190600 NM_195281.1 - - 4e+0 At3g49305 - C.G. S.X.
0.03 1e-8 63 Os05g0273201 9633.m01723 - - 4e+0 At2g46150 - C.G. S.X.
0.02 2e-3 46 Os06g0625300 9634.m04050 - Peptidoglycan-binding LysM domain containingprotein 6e-2 At5g60490 FLA12 C.G. S.X.
0.01 1e-5 54 Os02g0679101 9630.m04421 - - 1e+0 At5g54580 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.01 1e-5 54 Os02g0679200 AK110789.1 - TPR-like domain containing protein 8e-1 At5g54580 RNA recognition motif (RRM)-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 42 Arabidopsis thaliana At1g30475 2745766 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MPBO - - - C.G. S.X.
0.02 4e-1 38 Glycine max PsAffx.C8000076_at PsAffx.C8000076 - - 4e+0 At1g24110 peroxidase, putative C.G. S.X.
0.01 9e-3 42 Hordeum vulgare Contig10771_s_at Contig10771 - - 3e+0 At5g06043 unknown protein C.G. S.X.
0.04 3e-2 42 Populus trichocarpa PtpAffx.200482.1.S1_at pmrna972 hypothetical protein - 5e-2 At1g02405 proline-rich family protein C.G. S.X.
0.02 3e-1 38 Triticum aestivum TaAffx.92850.1.S1_at BJ245056 - - 4e+0 At3g12830 auxin-responsive family protein C.G. S.X.
0.01 9e-2 38 Vitis vinifera 1618578_at CF203270.1 - - 5e-12 At3g05540 - C.G. S.X.
0.26 3e-58 226 Zea mays Zm.15204.1.A1_at BM268605 - - 8e-12 At3g09650 HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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