CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0689100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os11g0689100 AK108692.1 - Disease resistance protein family protein 2e+0 At4g22400 unknown protein S.X. H.G.
0.60 79.7 Os03g0121300 AK064633.1 - Peroxidase 1 9e-3 At5g14130 peroxidase, putative S.X. H.G.
0.57 77.0 Os01g0327000 NM_183815.1 - Conserved hypothetical protein 7e-7 At1g14540 anionic peroxidase, putative S.X. H.G.
0.50 68.0 Os06g0652600 AK101495.1 - Lustrin A 2e-1 At2g40970 myb family transcription factor S.X. H.G.
0.40 51.1 Os02g0581200 AK062477.1 - Conserved hypothetical protein 2e+0 At4g24026 unknown protein S.X. H.G.
0.29 31.1 Os07g0524900 AK071512.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g16240 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
62.9 99.9 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
44.8 99.9 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
35.8 99.8 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
31.1 99.7 GSM275405 Azucena root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
29.0 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.8 99.6 GSM275411 Azucena root tip_Buckled at the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
22.4 99.3 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
17.5 98.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.0 98.2 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.6 98.1 GSM275406 Azucena root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 5e-61 238 Os10g0131700 NM_194732.1 - NB-ARC domain containing protein 1e+0 At3g42180 catalytic/ transferase, transferring glycosyl groups C.G. S.X.
0.14 4e-43 178 Os10g0131800 NM_194728.1 - Conserved hypothetical protein 2e+0 At3g53370 DNA-binding S1FA family protein C.G. S.X.
0.08 1e-18 97 Os11g0480000 AK064142.1 - Disease resistance protein family protein 6e+0 At5g42770 - C.G. S.X.
0.08 5e-18 95 Os11g0687900 AK103659.1 - Hypothetical protein 1e+0 At5g22390 unknown protein C.G. S.X.
0.07 7e-14 81 Os11g0606500 AK065351.1 - Disease resistance protein family protein 2e+0 At4g37730 AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7) C.G. S.X.
0.04 1e-12 77 Os11g0605900 CB664533 - Hypothetical protein 2e+0 At3g47710 bHLH family protein C.G. S.X.
0.03 2e-14 83 Os11g0606900 9639.m03588 - Disease resistance protein family protein 2e+0 At2g42310 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 36 Arabidopsis thaliana At4g22400 828335 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 7e-1 38 Glycine max Gma.670.1.S1_at CA934955 - - 1e+1 At5g15390 tRNA/rRNA methyltransferase (SpoU) family protein C.G. S.X.
0.02 6e-2 40 Hordeum vulgare Contig14335_at Contig14335 - - 2e-1 At1g49230 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 7e-1 38 Populus trichocarpa PtpAffx.110351.2.S1_a_at DN499394 hypothetical protein - 3e-1 At3g45690 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.14 2e-31 139 Triticum aestivum TaAffx.12350.1.S1_at BJ270540 - - 1e+0 At3g09032 unknown protein C.G. S.X.
0.01 6e-1 36 Vitis vinifera 1614165_x_at AY427086.1 - - 2e+0 At5g63270 nitrate-responsive NOI protein, putative C.G. S.X.
0.01 5e-2 40 Zea mays Zm.4112.1.A1_at AI834747 hypothetical protein LOC100216927 - 4e+0 At1g35190 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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