CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0681800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 96.4 Os11g0681800 9639.m04238 - - 2e+0 At4g27890 nuclear movement family protein S.X. H.G.
0.55 73.7 Os11g0703300 9639.m04460 - - 6e-2 At3g44750 HDA3 (HISTONE DEACETYLASE 3) S.X. H.G.
0.40 51.1 Os07g0197200 9635.m00955 - - 2e+0 At4g28290 unknown protein S.X. H.G.
0.33 38.8 Os04g0608700 NM_185948.1 - Zn-finger, CCHC type domain containing protein 4e-1 At3g07460 unknown protein S.X. H.G.
0.31 34.5 Os08g0212500 9636.m01158 - - 2e+0 At2g41835 zinc finger (C2H2 type, AN1-like) family protein S.X. H.G.
0.28 31.1 Os01g0283400 AK119993.1 - Conserved hypothetical protein 3e-1 At5g06480 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein S.X. H.G.
0.15 10.3 Os11g0294200 9639.m01755 - - 6e-1 At1g73830 BEE3 (BR ENHANCED EXPRESSION 3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.0 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.5 99.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.0 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.8 99.6 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.1 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.9 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 8e-11 69 Os04g0433000 AK109803.1 - TRAF-like domain containing protein 3e+0 At3g21610 - C.G. S.X.
0.09 8e-14 79 Os11g0619900 9639.m03706 - - 2e+0 At5g15330 SPX4 (SPX DOMAIN GENE 4) C.G. S.X.
0.07 8e-14 79 Os11g0622600 9639.m03731 - MATH domain containing protein 2e+0 At4g17440 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At4g27890 828902 nuclear movement family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFB - - - C.G. S.X.
0.02 3e+0 34 Glycine max PsAffx.CL575Contig1_at PsAffx.CL575Contig1 - - 5e-1 At1g64490 unknown protein C.G. S.X.
0.03 1e-3 44 Hordeum vulgare Contig5367_at Contig5367 - - 6e-5 At3g06190 BPM2 (BTB-POZ AND MATH DOMAIN 2) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa Ptp.6714.2.S1_a_at BU837909 hypothetical protein - 7e-5 At4g38495 - C.G. S.X.
0.03 9e-3 42 Triticum aestivum TaAffx.92409.1.S1_at BJ267653 - - 1e+0 At3g21350 RNA polymerase transcriptional regulation mediator-related C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1608604_at BQ796866 hypothetical protein LOC100260136 - 7e-24 At3g05560 60S ribosomal protein L22-2 (RPL22B) C.G. S.X.
0.05 1e-3 44 Zea mays Zm.13588.1.A1_at AY107800.1 - - 1e+0 At4g34670 40S ribosomal protein S3A (RPS3aB) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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