CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0671700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os11g0671700 9639.m04167 - - 1e-1 At3g13830 F-box family protein S.X. H.G.
0.63 82.7 Os03g0612800 9631.m04004 - - 1e+0 At3g29305 unknown protein S.X. H.G.
0.55 73.7 Os12g0211400 9640.m01026 - HhH-GPD family protein 7e-1 At4g17310 unknown protein S.X. H.G.
0.50 68.0 Os02g0569700 9630.m03441 - - 2e+0 At5g45830 DOG1 (DELAY OF GERMINATION 1) S.X. H.G.
0.40 51.1 Os02g0546050 9630.m03255 - - 1e+1 At4g28750 PSAE-1 (PSA E1 KNOCKOUT) S.X. H.G.
0.29 31.1 Os07g0642000 NM_188821.1 - - 9e-4 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
95.6 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
27.5 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.5 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 1e-14 81 Os11g0671200 9639.m04164 - - 4e-4 At5g66110 metal ion binding C.G. S.X.
0.04 2e-4 48 Os03g0617500 AK068729.1 - Cyclin, N-terminal domain containing protein 7e-2 At3g42310 unknown protein C.G. S.X.
0.04 2e-4 48 Os09g0364800 AK068537.1 - Heavy metal transport/detoxification proteindomain containing protein 2e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.02 9e-4 46 Os06g0215000 AK070686.1 - Conserved hypothetical protein 9e-1 At3g42310 unknown protein C.G. S.X.
0.01 9e-4 46 Os06g0685100 9634.m04589 - COBRA-like protein 10 precursor 2e-2 At3g42310 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 38 Arabidopsis thaliana At3g13830 820595 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.03 6e-1 36 Glycine max PsAffx.CL1Contig1_at PsAffx.CL1Contig1 - - 1e-3 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.06 3e-3 42 Hordeum vulgare Contig3265_s_at Contig3265 - - 3e-2 At2g35910 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 6e-1 36 Populus trichocarpa PtpAffx.210792.1.S1_at pmrna21173 hypothetical protein - 5e-2 At5g63740 zinc finger protein-related C.G. S.X.
0.04 7e-3 42 Triticum aestivum TaAffx.40.1.S1_at AJ615341 - - 8e-5 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 2e-3 42 Vitis vinifera 1609773_at CB978867 hypothetical protein LOC100261732 - 1e+0 At3g11600 unknown protein C.G. S.X.
0.05 1e-2 40 Zea mays Zm.9667.1.A1_at BM341541 transcription factor MYB42 - 1e+0 At3g48490 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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