CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0669100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os11g0669100 AK068628.1 - Hypothetical protein 5e+0 At5g35620 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) S.X. H.G.
0.80 94.6 Os10g0482900 AK071332.1 - Glutaredoxin domain containing protein 3e-4 At3g11920 glutaredoxin-related S.X. H.G.
0.77 93.1 Os05g0486100 AK119823.1 - Protein kinase domain containing protein 7e-9 At5g49760 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
0.77 93.1 Os09g0472100 AK120390.1 - ABC transporter 2e-2 At1g51500 CER5 (ECERIFERUM 5) S.X. H.G.
0.42 53.9 Os01g0750600 NM_191238.1 - Protein kinase domain containing protein 4e-3 At3g18810 protein kinase family protein S.X. H.G.
0.36 44.0 Os01g0609900 AK121722.1 - PDR-like ABC transporter (PDR4 ABC transporter) 8e-22 At1g15520 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.8 99.8 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
32.1 99.7 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
28.2 99.6 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
23.5 99.4 GSM154939 Root_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
21.7 99.2 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
20.8 99.2 GSM195226 Root GSE7951 Genome-wide gene expression profiling of rice stigma
19.2 99.0 GSM154941 Root_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
17.1 98.8 GSM154940 Root_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
14.1 98.5 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
13.3 98.4 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 2e-62 242 Os11g0669400 9639.m04148 - - 6e-1 At2g42760 unknown protein C.G. S.X.
0.01 6e-1 38 Os01g0727800 AK108195.1 - Protease-associated PA domain containing protein 8e-2 At5g45650 subtilase family protein C.G. S.X.
0.01 6e-1 38 Os03g0395300 AK100564.1 - Plant protein of unknown function DUF827 familyprotein 4e-4 At2g26570 unknown protein C.G. S.X.
0.01 6e-1 38 Os04g0412800 AK060508.1 - Type I collagen alpha 1 6e-2 At2g36080 DNA-binding protein, putative C.G. S.X.
0.01 2e+0 36 Os03g0745400 AK071701.1 - Conserved hypothetical protein 5e-1 At4g28290 unknown protein C.G. S.X.
0.01 2e+0 36 Os04g0444200 AK072545.1 - Calmodulin-binding protein 60-B (Fragment) 2e-8 At2g18750 calmodulin-binding protein C.G. S.X.
0.01 2e+0 36 Os08g0288000 AK099411.1 - Hypothetical protein 2e+0 At4g25170 - C.G. S.X.
0.01 2e+0 36 Os10g0136000 9638.m00375 - - 2e+0 At3g60530 zinc finger (GATA type) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e+0 34 Arabidopsis thaliana At5g35620 833534 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection. - - - C.G. S.X.
0.01 2e+0 36 Glycine max Gma.16640.1.S1_at CD402927 - - 3e-4 At5g24520 TTG1 (TRANSPARENT TESTA GLABRA 1) C.G. S.X.
0.01 6e-1 36 Hordeum vulgare Contig5805_at Contig5805 - - 3e-2 At4g20280 TAF11 (TBP-ASSOCIATED FACTOR 11) C.G. S.X.
0.01 4e-1 38 Populus trichocarpa PtpAffx.22829.1.A1_at DN486173 - - 4e+0 At3g11470 4'-phosphopantetheinyl transferase family protein C.G. S.X.
0.02 1e+0 36 Triticum aestivum TaAffx.5739.1.S1_x_at CA700230 - - 4e+0 At4g25910 NFU3 C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1609410_s_at CA813677 hypothetical protein LOC100256197 - 9e-1 At2g37240 - C.G. S.X.
0.01 2e+0 34 Zea mays Zm.9576.1.A1_at CD999634 iron-sulfur assembly protein IscA - 3e-4 At1g10500 ATCPISCA (chloroplast-localized IscA-like protein) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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