CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0653300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.51 68.7 Os11g0653300 AK119392.1 - Hypothetical protein 3e-2 At3g21710 unknown protein S.X. H.G.
0.34 40.0 Os10g0150800 AK061299.1 - Protein of unknown function DUF1210 family protein 2e+0 At5g14340 AtMYB40 (myb domain protein 40) S.X. H.G.
0.33 38.8 Os10g0150600 AK072923.1 - Protein of unknown function DUF1210 family protein 5e-1 At2g01760 ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14) S.X. H.G.
0.33 38.8 Os10g0150700 AK067147.1 - Protein of unknown function DUF1210 family protein 2e+0 At5g46060 unknown protein S.X. H.G.
0.30 32.7 Os12g0628400 AK061110.1 - Fatty acid hydroxylase domain containing protein 1e-8 At4g20870 FAH2 (FATTY ACID HYDROXYLASE 2) S.X. H.G.
0.21 17.9 Os11g0661900 AK064062.1 - Hypothetical protein 8e-1 At5g57640 - S.X. H.G.
0.19 15.1 Os04g0545600 AK119259.1 - Uclacyanin 3-like protein 2e+0 At3g03090 AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1) S.X. H.G.
0.18 13.7 Os02g0232900 D17443.1 - Major intrinsic protein 3e-6 At4g18910 NIP1 S.X. H.G.
0.13 8.2 Os12g0571700 AK058855.1 - Hypothetical protein 3e-1 At3g46090 ZAT7 S.X. H.G.
0.10 5.7 Os01g0151700 AK099949.1 - Short-chain dehydrogenase Tic32 5e-2 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.7 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.3 99.7 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
29.1 99.7 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
26.1 99.5 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
17.3 98.9 GSM99859 TCHW P2_m103 control, biological rep2 GSE4438 Expression data from rice under salinity stress
15.4 98.7 GSM99875 TCHW P18_agami salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
14.9 98.6 GSM99871 TCHW P14_agami control, biological rep2 GSE4438 Expression data from rice under salinity stress
14.5 98.6 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
14.5 98.6 GSM99872 TCHW P15_agami control, biological rep3 GSE4438 Expression data from rice under salinity stress
11.8 98.3 GSM99873 TCHW P16_agami salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 2e-84 315 Os11g0654800 AK119407.1 - Hypothetical protein 9e-2 At1g75900 family II extracellular lipase 3 (EXL3) C.G. S.X.
0.04 9e-13 77 Os11g0652100 AK103061.1 - Hypothetical protein 6e-1 At2g43550 trypsin inhibitor, putative C.G. S.X.
0.03 3e-6 56 Os11g0480000 AK064142.1 - Disease resistance protein family protein 6e+0 At5g42770 - C.G. S.X.
0.02 9e-10 67 Os07g0141600 AK103156.1 - Pre-mRNA processing ribonucleoprotein, bindingregion domain containing protein 1e-17 At1g60170 emb1220 (embryo defective 1220) C.G. S.X.
0.02 2e-7 59 Os11g0655500 9639.m04020 - - 6e-3 At5g03380 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 3e-9 65 Os11g0655300 AK074002.1 - Disease resistance protein family protein 4e-1 At4g36420 ribosomal protein L12 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-2 42 Arabidopsis thaliana At3g21710 821725 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 1e-1 40 Glycine max PsAffx.C263000004_at PsAffx.C263000004 - - 4e-1 At2g23780 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 3e-3 44 Hordeum vulgare HVSMEg0015A14r2_at HVSMEg0015A14r2 - - 1e+0 At5g03905 hesB-like domain-containing protein C.G. S.X.
0.01 6e-1 38 Populus trichocarpa PtpAffx.200704.1.S1_at pmrna1357 hypothetical protein - 9e-1 At5g49120 senescence-associated protein-related C.G. S.X.
0.07 3e-23 111 Triticum aestivum TaAffx.23866.1.S1_at CA729264 - - 1e+0 At1g75550 glycine-rich protein C.G. S.X.
0.01 5e-1 36 Vitis vinifera 1609529_at CF372558 - - 4e-1 At4g35900 FD C.G. S.X.
0.01 7e-1 36 Zea mays Zm.473.1.S1_a_at U66608.1 cyclin type B-like - 2e-1 At4g35620 CYCB2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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