CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0648200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os11g0648200 9639.m03950 - - 2e+0 At4g11870 unknown protein S.X. H.G.
0.73 91.1 Os04g0347500 9632.m02642 - - 9e-2 At3g21120 F-box family protein S.X. H.G.
0.67 87.2 Os12g0165400 9640.m00608 - Hypothetical protein 1e+0 At1g53480 unknown protein S.X. H.G.
0.53 71.3 Os02g0126200 9630.m00240 - - 6e-1 At1g54095 unknown protein S.X. H.G.
0.46 60.9 Os11g0269700 AK071998.1 - Conserved hypothetical protein 2e+0 At2g47670 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.40 51.1 Os07g0133200 9635.m00340 - - 9e-1 At1g33860 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
252.7 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.7 98.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.3 98.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.1 98.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.2 98.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.3 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 2e-109 397 Os11g0648700 AK106845.1 - Hypothetical protein 4e+0 At2g34850 MEE25 (maternal effect embryo arrest 25) C.G. S.X.
0.01 2e-2 42 Os01g0872600 AK060248.1 - Hypothetical protein 6e-2 At1g72125 transporter C.G. S.X.
0.01 6e-2 40 Os01g0269500 AK103817.1 - Disease resistance protein family protein 4e-1 At1g34140 PAB1 (POLY(A) BINDING PROTEIN 1) C.G. S.X.
0.01 6e-2 40 Os08g0430700 AK101681.1 - Regulator of chromosomecondensation/beta-lactamase-inhibitor protein II domaincontaining protein 1e-5 At3g02510 regulator of chromosome condensation (RCC1) family protein C.G. S.X.
0.01 6e-2 40 Os12g0610500 AK106471.1 - SAM (and some other nucleotide) binding motifdomain containing protein 2e-11 At1g16650 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At4g11870 826794 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBFMAP - - - C.G. S.X.
0.03 3e+0 34 Glycine max GmaAffx.46532.1.S1_at BM732535 - - 1e-5 At4g03230 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding C.G. S.X.
0.02 2e-1 36 Hordeum vulgare HW09C22u_at HW09C22u - - 1e+0 At2g19350 unknown protein C.G. S.X.
0.02 4e-2 40 Populus trichocarpa PtpAffx.142161.1.S1_s_at BU867394 hypothetical protein - 8e-27 At1g79430 APL (ALTERED PHLOEM DEVELOPMENT) C.G. S.X.
0.08 6e-7 56 Triticum aestivum Ta.12049.1.A1_at BQ171484 - - 3e+0 At3g05900 neurofilament protein-related C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1622590_at CD800779 - - 2e-1 At5g52130 unknown protein C.G. S.X.
0.02 3e+0 32 Zea mays Zm.9341.1.A1_at BM348037 - - 2e+0 At3g44140 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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