CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0644500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os11g0644500 9639.m03915 - Transferase family protein 3e+0 At1g28450 AGL58 (AGAMOUS-LIKE 58) S.X. H.G.
0.09 4.9 Os08g0305150 9636.m02087 - - 5e+0 At5g61660 glycine-rich protein S.X. H.G.
0.06 3.0 Os02g0738300 AK108113.1 - Conserved hypothetical protein 1e-1 At4g14695 unknown protein S.X. H.G.
0.04 2.0 Os11g0221800 9639.m01091 - - 9e-1 At2g39020 GCN5-related N-acetyltransferase (GNAT) family protein S.X. H.G.
0.03 1.4 Os05g0473800 9633.m03691 - - 2e+0 At2g27530 PGY1 (PIGGYBACK1) S.X. H.G.
0.03 1.4 Os07g0185100 AK119508.1 - Conserved hypothetical protein 7e-1 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.6 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.2 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.0 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.6 99.7 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.4 99.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.8 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.69 4e-155 549 Os07g0244600 9635.m01398 - Hypothetical protein 2e-3 At2g04190 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.38 3e-32 141 Os01g0261600 9629.m01560 - Transferase family protein 3e+0 At5g14380 AGP6 (Arabinogalactan proteins 6) C.G. S.X.
0.12 9e-8 59 Os01g0261700 AK100325.1 - Hypothetical protein 2e+0 At4g08230 glycine-rich protein C.G. S.X.
0.06 6e-9 63 Os08g0158800 AK107200.1 - Hypothetical protein 2e-1 At1g44191 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At1g28450 839743 AGL58 (AGAMOUS-LIKE 58) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFO - - - C.G. S.X.
0.03 4e-3 44 Glycine max PsAffx.psMY009iE02r_at PsAffx.psMY009iE02r - - 1e+0 At1g08180 unknown protein C.G. S.X.
0.15 1e-6 54 Hordeum vulgare Contig5587_at Contig5587 - - 8e-1 At2g30130 ASL5 C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.208939.1.S1_at pmrna17714 hypothetical protein - 2e-3 At1g68360 zinc finger protein-related C.G. S.X.
0.33 4e-61 236 Triticum aestivum TaAffx.25358.1.S1_at CA720263 - - 1e+0 At5g15480 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 3e+0 32 Vitis vinifera 1615089_at CF512548 hypothetical protein LOC100260443 - 1e-140 At2g29550 TUB7 C.G. S.X.
0.29 1e-46 186 Zea mays Zm.14541.1.S1_a_at AY107924.1 agmatine coumaroyltransferase - 2e+1 At5g18403 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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