CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0638700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os11g0638700 CA766587 - Conserved hypothetical protein 1e+0 At5g66490 unknown protein S.X. H.G.
0.80 94.6 Os04g0657600 AK119428.1 - Cyclin-like F-box domain containing protein 3e+0 At4g01600 GRAM domain-containing protein / ABA-responsive protein-related S.X. H.G.
0.67 87.2 Os02g0104601 9630.m00044 - - 2e+0 At4g18940 cyclic phosphodiesterase, putative S.X. H.G.
0.44 58.1 Os01g0192800 NM_189684.1 - - 1e-1 At3g15290 3-hydroxybutyryl-CoA dehydrogenase, putative S.X. H.G.
0.43 55.4 Os09g0489800 AK119382.1 - Hypothetical protein 6e-3 At5g06950 AHBP-1B S.X. H.G.
0.40 51.1 Os04g0557200 AK111704.1 - Anthocyanin regulatory R-S protein 6e-2 At5g41315 GL3 (GLABROUS 3) S.X. H.G.
0.40 51.1 Os08g0279900 9636.m01788 - - 2e-1 At1g74140 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.1 99.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.6 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.3 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.8 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 4e-51 204 Os08g0194900 9636.m00911 - - 4e+0 At5g08180 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein C.G. S.X.
0.05 3e-21 105 Os04g0197700 9632.m01086 - - 9e-1 At3g01820 adenylate kinase family protein C.G. S.X.
0.04 7e-16 87 Os10g0190500 AK070455.1 - Protein of unknown function DUF594 family protein 3e-1 At5g06250 transcription factor C.G. S.X.
0.04 4e-14 81 Os11g0638900 AK062181.1 - ARM repeat fold domain containing protein 3e-1 At1g69640 SBH1 (SPHINGOID BASE HYDROXYLASE 1) C.G. S.X.
0.04 4e-8 61 Os04g0156000 9632.m00637 - - 3e-1 At1g04770 male sterility MS5 family protein C.G. S.X.
0.04 3e-3 44 Os12g0481900 9640.m02867 - - 2e-2 At2g25190 unknown protein C.G. S.X.
0.03 1e-8 63 Os04g0142600 9632.m00481 - - 4e-1 At1g32361 ATL1F C.G. S.X.
0.03 2e+0 34 Os12g0468100 9640.m02715 - - 5e+0 At4g40060 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16) C.G. S.X.
0.02 1e-2 42 Os03g0772900 AK110689.1 - Conserved hypothetical protein 3e+0 At5g40510 - C.G. S.X.
0.02 1e-2 42 Os12g0149300 AK110842.1 - Xyloglucan 6-xylosyltransferase (EC 2.4.2.39)(AtXT1) 3e-3 At5g07720 galactosyl transferase GMA12/MNN10 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At5g66490 836781 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P - - - C.G. S.X.
0.03 8e-3 42 Glycine max PsAffx.C3000031_at PsAffx.C3000031 - - 4e-1 At1g11700 unknown protein C.G. S.X.
0.04 2e-1 36 Hordeum vulgare Contig9855_s_at Contig9855 - - 6e-5 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) C.G. S.X.
0.04 3e-2 40 Populus trichocarpa PtpAffx.60606.2.A1_s_at CV271130 - - 2e-2 At3g18800 unknown protein C.G. S.X.
0.04 6e-3 42 Triticum aestivum Ta.4108.2.A1_at BJ264503 - - 4e+0 At3g63040 unknown protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1612089_at CF212718 - - 2e+0 At5g12235 CLE22 (CLAVATA3/ESR-RELATED 22) C.G. S.X.
0.02 3e-3 42 Zea mays Zm.1502.1.A1_at CF637870 flavonoid O-methyltransferase - 2e+0 At3g09032 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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