Gene omics information

Query gene ID	Os11g0635500
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.85	96.1	Os11g0635500	AK067543.1	-	Cytochrome P450 family protein	4e-3	At5g06380	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.77	93.1	Os07g0558300	AK120618.1	-	Inositol monophosphatase family protein	5e-2	At4g05090	inositol monophosphatase family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.71	89.6	Os08g0101700	AK061172.1	-	Cytochrome b561	1e-1	At1g13930	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.59	78.0	Os04g0657300	CB624212	-	Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1)	2e-1	At1g68552	CPuORF53 (Conserved peptide upstream open reading frame 53)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.58	77.0	Os10g0530500	AF402800.1	-	Glutathione S-transferase, C-terminal domaincontaining protein	1e-1	At3g09270	ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.57	77.0	Os10g0209700	AK070579.1	-	Heavy metal transport/detoxification proteindomain containing protein	6e-1	At5g63530	ATFP3	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.56	76.3	Os12g0628100	AK121150.1	-	Actin depolymerizing factor (ADF) (Fragment)	2e-9	At4g25590	ADF7 (actin depolymerizing factor 7)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os03g0744700	AK071178.1	-	Conserved hypothetical protein	4e-2	At1g62250	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.52	69.6	Os12g0271700	AK110824.1	-	Solanesyl diphosphate synthase	1e-18	At1g17050	SPS2 (Solanesyl diphosphate synthase 2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.51	68.7	Os04g0657500	AK066638.1	-	Lipase, class 3 family protein	1e+0	At3g17100	transcription factor	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.2	98.8	GSM421706	XOO, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.7	98.4	GSM421726	MOCK, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.0	98.3	GSM421686	XOC, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.4	98.2	GSM421683	XOC, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.0	98.2	GSM421682	XOC, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.2	98.0	GSM421694	XOO, 4 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.9	98.0	GSM174885	B FR13 3 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.9	98.0	GSM174883	A mock 3 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.7	98.0	GSM421674	XOC, 4 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.4	97.9	GSM421724	MOCK, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	6e-90	333	Os06g0642200	9634.m04198	-	-	2e-1	At4g13310	CYP71A20	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	2e-74	282	Os06g0642300	9634.m04199	-	-	2e-4	At3g26330	CYP71B37	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.22	2e-15	85	Os01g0377000	NM_193877.1	-	Cytochrome P450 family protein	8e-1	At4g13770	CYP83A1 (CYTOCHROME P450 83A1)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.11	3e-11	71	Os06g0641800	BQ906171	-	Cytochrome P450 family protein	3e+0	At5g04250	OTU-like cysteine protease family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.07	2e-12	75	Os02g0186900	9630.m00853	-	Cytochrome P450 family protein	8e-1	At4g37410	CYP81F4	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.05	2e-9	65	Os02g0185300	AK068907.1	-	Cytochrome P450 family protein	6e-2	At3g26270	CYP71B25	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e-3	44	Arabidopsis thaliana	At5g06380	830526	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e-3	46	Glycine max	GmaAffx.41769.2.S1_at	BM891556	-	-	1e-2	At5g06380	unknown protein	C.G.	S.X.	Please select
0.04	2e-3	44	Hordeum vulgare	Contig18990_at	Contig18990	-	-	7e+0	At5g40600	unknown protein	C.G.	S.X.	Please select
0.02	9e-2	40	Populus trichocarpa	PtpAffx.214096.1.S1_x_at	pmrna27442	hypothetical protein	-	8e-1	At4g28290	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	6e-2	40	Triticum aestivum	TaAffx.55569.1.S1_at	CA664265	-	-	3e-1	At4g37320	CYP81D5	C.G.	S.X.	Please select
0.02	7e-2	38	Vitis vinifera	1611306_at	CB972831	hypothetical protein LOC100245465	-	2e-6	At5g04630	CYP77A9	C.G.	S.X.	Please select
0.03	1e-1	38	Zea mays	Zm.14041.1.S1_at	AY104522.1	-	-	1e+1	At4g19760	catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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