Gene omics information

Query gene ID	Os11g0633500
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.8	Os11g0633500	AK066215.1	-	NBS-LRR disease resistance protein homologue(Fragment)	2e+0	At2g16070	PDV2 (PLASTID DIVISION2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os07g0250900	AK107935.1	-	Harpin-induced 1 domain containing protein	3e-2	At1g36940	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.28	31.1	Os01g0838900	AK066366.1	-	Trp repressor/replication initiator domaincontaining protein	7e-4	At4g08520	clathrin adaptor complex small chain family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	11.3	Os04g0302300	AK072639.1	-	Conserved hypothetical protein	5e-1	At4g04500	protein kinase family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	11.3	Os01g0616800	AK111368.1	-	Hypothetical protein	9e+0	At5g16550	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	11.3	Os12g0405400	AK066879.1	-	Conserved hypothetical protein	2e-2	At2g30560	glycine-rich protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
204.1	100.0	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
13.0	98.4	GSM377084	Genomic DNA - 45 day old leaf sample - mutant f1856	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2	98.0	GSM377072	Genomic DNA - 45 day old leaf sample - mutant d1137	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2	97.9	GSM377075	Genomic DNA - 45 day old leaf sample - mutant g650	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8	97.6	GSM377077	Genomic DNA - 45 day old leaf sample - mutant g6489	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8	97.6	GSM377086	Genomic DNA - 45 day old leaf sample - IR64 wtcheck	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.6	97.5	GSM377076	Genomic DNA - 45 day old leaf sample - mutant g6485	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1	97.4	GSM377080	Genomic DNA - 45 day old leaf sample - mutant g6728	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.0	97.4	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.8	97.3	GSM377082	Genomic DNA - 45 day old leaf sample - mutant g9799	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-21	107	Os03g0267100	AK120655.1	-	Conserved hypothetical protein	6e-16	At3g46230	ATHSP17.4	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	5e-15	85	Os10g0403400	AK100194.1	-	Hypothetical protein	7e-1	At4g33660	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	5e-12	75	Os08g0197500	AK068342.1	-	Cyclin-like F-box domain containing protein	2e+0	At3g20900	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	8e-8	61	Os02g0583900	AK070354.1	-	Conserved hypothetical protein	6e+0	Atcg00330	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e-12	77	Os12g0285100	AK103843.1	-	ARM repeat fold domain containing protein	3e-5	At5g46730	glycine-rich protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	5e-12	75	Os06g0257200	AK068347.1	-	Signal recognition particle, 9 kDa and 14 kDaprotein family protein	2e+0	At3g49100	signal recognition particle 9 kDa protein, putative / SRP9, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e-5	54	Os01g0863100	AK063301.1	-	Conserved hypothetical protein	3e-1	At3g58690	protein kinase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	3e-4	50	Os03g0823200	AK072964.1	-	Major facilitator superfamily protein	9e-2	At1g33500	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e-3	48	Os05g0143200	AK100211.1	-	Conserved hypothetical protein	5e+0	At5g11416	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e+0	36	Arabidopsis thaliana	At2g16070	816104	PDV2 (PLASTID DIVISION2)	An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.01	3e+0	36	Glycine max	HgAffx.20070.1.S1_at	CB826547	-	-	3e-1	At2g24592	unknown protein	C.G.	S.X.	Please select
0.01	3e-1	38	Hordeum vulgare	AF032687_at	AF032687	-	-	2e+0	At3g52130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.01	8e-1	38	Populus trichocarpa	PtpAffx.16387.1.S1_at	BU892635	-	-	3e-1	At1g67080	ABA4 (abscisic acid (ABA)-deficient 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	2e+0	36	Triticum aestivum	TaAffx.111456.1.S1_at	CA640210	-	-	4e+0	At4g24204	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.01	4e-2	40	Vitis vinifera	1620981_at	CB915724	hypothetical protein LOC100255721	-	1e+0	At3g15760	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	34	Zea mays	Zm.9769.1.A1_at	BM338306	-	-	8e-2	At3g09960	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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