CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0591800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.32 36.3 Os11g0591800 9639.m03440 - Wound-induced protein WIN2 precursor 4e-9 At3g04720 PR4 (PATHOGENESIS-RELATED 4) S.X. H.G.
0.57 77.0 Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) S.X. H.G.
0.55 73.7 Os10g0530900 AF309376.1 - Glutathione S-transferase GST 30 (EC 2.5.1.18) 2e+0 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
0.44 58.1 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) S.X. H.G.
0.40 51.1 Os03g0154000 AK103088.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g13882 structural constituent of ribosome S.X. H.G.
0.32 36.3 Os01g0934800 Z34270.1 - Alpha/beta hydrolase fold domain containingprotein 1e-1 At2g23580 MES4 (METHYL ESTERASE 4) S.X. H.G.
0.31 34.5 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
62.1 99.9 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
53.8 99.9 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
41.5 99.9 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
37.8 99.8 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
27.0 99.6 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
13.6 98.5 GSM262016 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.9 98.4 GSM262017 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.2 98.3 GSM262012 Nipponbare, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.2 97.7 GSM100440 Rice Azucena 0ppm Arsenate (Control) Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
8.1 97.7 GSM149409 Rice Azucena 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 2e-21 103 Os11g0592100 AY435041.1 - Barwin 6e-3 At3g04720 PR4 (PATHOGENESIS-RELATED 4) C.G. S.X.
0.27 4e-29 129 Os11g0592000 AK121059.1 - Barwin 7e-3 At3g04720 PR4 (PATHOGENESIS-RELATED 4) C.G. S.X.
0.02 7e+0 32 Os06g0175400 NM_185681.1 - BSD domain containing protein 6e-1 At4g39260 GR-RBP8 C.G. S.X.
0.02 7e+0 32 Os08g0474000 AK062882.1 - AP2 domain containing protein RAP2.6 (Fragment) 1e-4 At1g22985 AP2 domain-containing transcription factor, putative C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 4e-9 61 Arabidopsis thaliana At3g04720 819632 PR4 (PATHOGENESIS-RELATED 4) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. - - - C.G. S.X.
0.04 2e+1 30 Glycine max PsAffx.psHA008iB01r_s_at PsAffx.psHA008iB01r - - 3e+0 At3g19800 unknown protein C.G. S.X.
0.24 5e-10 63 Hordeum vulgare Contig6576_at Contig6576 - - 6e-6 At3g04720 PR4 (PATHOGENESIS-RELATED 4) C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.214777.1.S1_at pmrna28621 hypothetical protein - 1e+1 At1g33850 40S ribosomal protein S15, putative C.G. S.X.
0.17 1e-21 103 Triticum aestivum Ta.9226.1.S1_at CD915938 Pathogenesis-related protein 4 - 7e+0 At5g45890 SAG12 (SENESCENCE-ASSOCIATED GENE 12) C.G. S.X.
0.11 1e-6 52 Vitis vinifera 1620518_at CF201341.1 - - 9e-14 At3g04720 PR4 (PATHOGENESIS-RELATED 4) C.G. S.X.
0.15 7e-6 50 Zea mays Zm.2227.1.A1_at BM381059 hypothetical protein LOC100191593 - 6e-3 At3g04720 PR4 (PATHOGENESIS-RELATED 4) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage