CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0552300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os11g0552300 9639.m03151 - - 1e-1 At5g60680 unknown protein S.X. H.G.
0.67 87.2 Os06g0479800 9634.m02732 - - 3e+0 At5g37415 sequence-specific DNA binding / transcription factor S.X. H.G.
0.67 87.2 Os06g0111901 NM_185397.1 - - 3e-1 At1g71740 unknown protein S.X. H.G.
0.57 77.0 Os08g0454500 9636.m03547 - Flavonoid 7-O-methyltransferase (EC 2.1.1.6) 8e+0 At5g05380 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) S.X. H.G.
0.43 55.4 Os08g0340850 9636.m02478 - - 4e-1 At2g37950 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.36 44.0 Os08g0163032 NM_189115.1 - - 3e+0 At5g42850 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
48.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.2 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.7 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.3 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.5 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-2 38 Os07g0655800 AU182660 - Conserved hypothetical protein 3e+0 At3g30160 unknown protein C.G. S.X.
0.02 6e-2 38 Os09g0363500 AK065312.1 - Conserved hypothetical protein 1e+0 At5g60680 unknown protein C.G. S.X.
0.01 6e-2 38 Os06g0103900 AK111870.1 - Putative methyltransferase DUF248 family protein 3e-10 At4g10440 dehydration-responsive family protein C.G. S.X.
0.01 6e-2 38 Os06g0104000 AK068490.1 - Conserved hypothetical protein 5e-3 At2g46915 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 36 Arabidopsis thaliana At5g60680 836189 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PM - - - C.G. S.X.
0.05 2e-1 36 Glycine max GmaAffx.82722.1.S1_at BM085018 - - 5e-2 At5g60680 unknown protein C.G. S.X.
0.03 6e-2 36 Hordeum vulgare Contig14599_at Contig14599 - - 3e-2 At3g17160 unknown protein C.G. S.X.
0.04 7e-1 34 Populus trichocarpa PtpAffx.40283.1.S1_at CV271867 hypothetical protein - 2e-1 At5g60680 unknown protein C.G. S.X.
0.05 3e-2 38 Triticum aestivum Ta.3909.3.S1_at BJ281254 - - 4e+0 At4g15460 glycine-rich protein C.G. S.X.
0.05 9e+0 28 Vitis vinifera 1622307_at CF413911 - - 2e+0 At5g16110 unknown protein C.G. S.X.
0.05 2e-1 34 Zea mays Zm.6246.2.A1_at AI677558 - - 9e-7 At2g22080 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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