CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0544000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os11g0544000 AK066017.1 - - 7e-2 At1g19990 unknown protein S.X. H.G.
0.95 99.6 Os07g0510100 AK066776.1 - Methionine aminopeptidase-like protein 3e-19 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) S.X. H.G.
0.78 93.4 Os01g0829000 AK065327.1 - Conserved hypothetical protein 7e-1 At5g43410 ethylene-responsive factor, putative S.X. H.G.
0.60 79.7 Os01g0618400 NM_192814.1 - RNA helicase (Fragment) 2e-20 At5g63630 DEAD box RNA helicase, putative S.X. H.G.
0.53 71.3 Os08g0345400 AK065348.1 - Conserved hypothetical protein 1e-2 At2g04360 unknown protein S.X. H.G.
0.50 68.0 Os01g0306800 AK099426.1 - Conserved hypothetical protein 9e-1 At5g42370 unknown protein S.X. H.G.
0.50 68.0 Os03g0736400 AK105812.1 - Conserved hypothetical protein 95 family protein 1e-24 At3g28460 unknown protein S.X. H.G.
0.38 46.9 Os02g0751600 AK072946.1 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 4e-2 At5g03030 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.38 46.9 Os01g0558800 AK068120.1 - Conserved hypothetical protein 8e-1 At5g19300 - S.X. H.G.
0.36 44.0 Os10g0512500 AK067203.1 - Protein of unknown function UPF0044 family protein 1e+0 At1g18210 calcium-binding protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.6 99.4 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
22.0 99.3 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
19.3 99.0 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.9 98.9 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.5 98.9 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
16.9 98.8 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
14.5 98.6 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
14.1 98.5 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.2 98.2 GSM302919 leaf_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
11.0 98.2 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 0 728 Os11g0543900 AK107059.1 - - 2e-1 At2g28570 unknown protein C.G. S.X.
0.02 3e-5 52 Os01g0332900 9629.m02213 - Hypothetical protein 5e-4 At4g11660 AT-HSFB2B C.G. S.X.
0.02 7e-3 44 Os07g0655800 AU182660 - Conserved hypothetical protein 3e+0 At3g30160 unknown protein C.G. S.X.
0.01 1e-4 50 Os11g0154100 9639.m00473 - - 3e+0 At5g66280 GMD1 (GDP-D-MANNOSE 4,6-DEHYDRATASE 1) C.G. S.X.
0.01 5e-4 48 Os01g0615500 NM_192788.1 - ABC transporter related domain containing protein 3e-1 At2g13610 ABC transporter family protein C.G. S.X.
0.01 2e-3 46 Os12g0577800 AK068994.1 - Plant protein of unknown function DUF863 familyprotein 7e-3 At1g47970 unknown protein C.G. S.X.
0.01 1e-1 40 Os02g0555100 9630.m03332 - TPR-like domain containing protein 6e-2 At2g03420 unknown protein C.G. S.X.
0.01 1e-1 40 Os03g0135800 AK072160.1 - Hypothetical protein 2e-6 Atcg00680 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 7e-2 40 Arabidopsis thaliana At1g19990 838588 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA - - - C.G. S.X.
0.01 3e-5 52 Glycine max Gma.1423.1.S1_a_at AI960045 - - 3e-24 At4g36780 transcription regulator C.G. S.X.
0.37 4e-156 551 Hordeum vulgare Contig10346_at Contig10346 - - 8e-1 At2g22080 unknown protein C.G. S.X.
0.02 2e+0 36 Populus trichocarpa PtpAffx.40802.3.S1_a_at BU892317 - - 1e+0 At2g37920 emb1513 (embryo defective 1513) C.G. S.X.
0.07 2e-17 91 Triticum aestivum Ta.10634.1.A1_at BQ166154 - - 1e-1 At3g13882 structural constituent of ribosome C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1608560_at CF405443 hypothetical protein LOC100250989 - 3e+0 At3g09890 ankyrin repeat family protein C.G. S.X.
0.01 8e-3 42 Zea mays Zm.5314.1.A1_at CF637974 transcription initiation factor IIF, alpha subunit - 4e-11 At4g12610 transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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