CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0513600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 99.1 Os11g0513600 9639.m02853 - - 2e+0 At5g49820 emb1879 (embryo defective 1879) S.X. H.G.
0.59 78.0 Os08g0164732 9636.m00615 - - 4e-1 At4g19200 proline-rich family protein S.X. H.G.
0.56 76.3 Os10g0535300 9638.m03521 - - 4e+0 At5g56990 - S.X. H.G.
0.56 76.3 Os10g0349500 NM_195928.1 - - 6e+0 At4g02610 tryptophan synthase, alpha subunit, putative S.X. H.G.
0.55 73.7 Os11g0260700 9639.m01431 - - 2e+0 At1g16190 DNA repair protein RAD23, putative S.X. H.G.
0.52 69.6 Os06g0558501 9634.m03450 - - 2e+0 At1g53285 unknown protein S.X. H.G.
0.50 68.0 Os06g0367800 9634.m02608 - - 3e+0 At5g40500 unknown protein S.X. H.G.
0.50 68.0 Os11g0430500 9639.m02137 - - 3e+0 At2g35310 transcriptional factor B3 family protein S.X. H.G.
0.48 63.7 Os04g0207200 9632.m01180 - - 1e+1 At5g18970 AWPM-19-like membrane family protein S.X. H.G.
0.46 60.9 Os04g0158000 9632.m00633 - - 4e+0 At3g03800 SYP131 (SYNTAXIN OF PLANTS 131) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.8 99.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.1 99.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.7 99.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.7 99.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.4 99.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.8 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.0 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.67 0 916 Os11g0513900 AK101049.1 - - 2e+0 At5g42785 unknown protein C.G. S.X.
0.34 0 1227 Os11g0513500 CF305688 - Hypothetical protein 1e+0 At4g32208 - C.G. S.X.
0.02 1e-2 44 Os11g0516800 AK069747.1 - Hypothetical protein 4e-1 At2g45840 - C.G. S.X.
0.02 5e-2 42 Os11g0518900 AK102677.1 - Hypothetical protein 3e-1 At5g65207 unknown protein C.G. S.X.
0.01 2e-1 40 Os07g0187200 AK065328.1 - Hypothetical protein 5e-4 At4g36400 FAD linked oxidase family protein C.G. S.X.
0.01 8e-1 38 Os02g0107600 AK067983.1 - Conserved hypothetical protein 3e-2 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.01 8e-1 38 Os05g0112000 AK107650.1 - Zn-finger, RING domain containing protein 5e-13 At2g28840 ankyrin repeat family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 36 Arabidopsis thaliana At5g49820 835045 emb1879 (embryo defective 1879) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PMFO - - - C.G. S.X.
0.01 6e-1 38 Glycine max GmaAffx.51759.1.S1_at BM886856 - - 4e+0 At5g62320 ATMYB99 (MYB DOMAIN PROTEIN 99) C.G. S.X.
0.01 2e-1 38 Hordeum vulgare Contig14769_at Contig14769 - - 8e-1 At3g21830 ASK8 (ARABIDOPSIS SKP1-LIKE 8) C.G. S.X.
0.02 2e+0 36 Populus trichocarpa PtpAffx.206807.1.S1_s_at pmrna13514 hypothetical protein - 2e-68 At4g32140 - C.G. S.X.
0.01 4e-1 38 Triticum aestivum TaAffx.64112.1.S1_at BJ314768 - - 1e+0 At1g05430 unknown protein C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1610793_at CD008344 - - 6e-6 At4g18840 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 3e+0 34 Zea mays Zm.4793.3.A1_a_at CD995492 hypothetical protein LOC100193376 - 5e-3 At3g10860 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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