Gene omics information

Query gene ID Os11g0487600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8295.0Os11g0487600CB618435-Cytochrome P450 family protein1e-4At3g61880CYP78A9 (CYTOCHROME P450 78A9)S.X.H.G.
0.3236.3Os12g0484600AK058449.1-Nodule-specific protein-like1e-2At1g63030ddf2 (DWARF AND DELAYED FLOWERING 2)S.X.H.G.
0.2625.6Os01g0695700CA766063-Multidrug resistance protein 1 homolog5e-7At4g18050PGP9 (P-GLYCOPROTEIN 9)S.X.H.G.
0.063.0Os10g0406300AK068588.1-The start codon is not identified.5e-17At2g34140Dof-type zinc finger domain-containing proteinS.X.H.G.
0.063.0Os01g0158400AK102322.1-Galactose-binding like domain containing protein2e+0At5g63000unknown proteinS.X.H.G.
0.042.0Os10g0521500AK105796.1-Esterase/lipase/thioesterase domain containingprotein3e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.042.0Os09g0272000AK068208.1-Heavy metal transport/detoxification proteindomain containing protein1e-1At5g5729060S acidic ribosomal protein P3 (RPP3B)S.X.H.G.
0.042.0Os01g0650100AK063873.1-Hypothetical protein1e+0At2g29530mitochondrial import inner membrane translocase (TIM10)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.799.3GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
20.899.2GSM262020Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
17.498.9GSM262019Nipponbare, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
15.998.7GSM421706XOO, 96 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.998.6GSM421726MOCK, 96 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.898.6GSM262018Nipponbare, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.398.2GSM262014Nipponbare, 4 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.998.1GSM262007IAC165, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.798.1GSM421686XOC, 96 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.698.1GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.068e-446Os09g05287009637.m03020-Cytochrome p450 (CYP78A9)6e-7At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.048e-136Os03g04177009631.m02978-E-class P450, group I family protein9e-16At1g74110CYP78A10C.G.S.X.
0.032e-138Os03g01345009631.m00332-Cytochrome p450 (CYP78A9)3e+0At2g46660CYP78A6C.G.S.X.
0.038e-136Os09g02793009637.m00834-Mitochondrial import inner membrane translocase,subunit Tim17/22 family protein3e+0At3g21390mitochondrial substrate carrier family proteinC.G.S.X.
0.012e-138Os10g0151800AK066347.1--3e-8At4g00830RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.018e-136Os05g0379500AK121450.1-NBS-LRR protein (Fragment)7e-1At4g11680zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.018e-136Os05g0380300AK120094.1-NBS-LRR protein (Fragment)6e-1At3g62090PIL2 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-448Arabidopsis thalianaAt3g61880825361CYP78A9 (CYTOCHROME P450 78A9)Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.---C.G.S.X.
0.132e-448Glycine maxGma.8215.2.S1_atBQ296859--3e-4At2g46660CYP78A6C.G.S.X.
0.091e-550Hordeum vulgareHU13P05r_atHU13P05r--1e+0At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.044e-240Populus trichocarpaPtpAffx.44494.1.A1_atCV247178cytochrome P450-2e-9At2g46660CYP78A6C.G.S.X.
0.042e+034Triticum aestivumTaAffx.42466.1.S1_atBF294046--2e-7At5g04330cytochrome P450, putative / ferulate-5-hydroxylase, putativeC.G.S.X.
0.032e+032Vitis vinifera1619648_s_atCF204375.1hypothetical protein LOC100257577-2e+0At1g48940plastocyanin-like domain-containing proteinC.G.S.X.
0.032e-446Zea maysZm.197.1.S1_atL23209.1cytochrome P-450 8-3e-4At1g74110CYP78A10C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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