CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0471200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os11g0471200 AK066957.1 - Conserved hypothetical protein 9e-2 At1g15430 - S.X. H.G.
0.50 68.0 Os01g0750100 AK067329.1 - WRKY transcription factor 31 1e-11 At3g58710 WRKY69 S.X. H.G.
0.40 51.1 Os10g0186800 9638.m00950 - Nucleic acid-binding OB-fold domain containingprotein 8e+0 At5g55940 emb2731 (embryo defective 2731) S.X. H.G.
0.23 21.2 Os10g0498300 AK060338.1 - Epoxide hydrolase 2e+0 At5g59870 HTA6 S.X. H.G.
0.10 5.7 Os07g0222900 CB645570 - KDPG and KHG aldolase family protein 3e+0 At3g52720 ACA1 (ALPHA CARBONIC ANHYDRASE 1) S.X. H.G.
0.04 2.0 Os01g0343500 AK071988.1 - TPR repeat containing protein 9e-10 At3g05625 binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
110.7 100.0 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
99.2 100.0 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
96.7 100.0 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
33.0 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
16.2 98.8 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.6 97.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.5 97.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.4 96.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 2e-38 161 Os02g0319150 9630.m02055 - - 2e+0 At2g21725 - C.G. S.X.
0.28 1e-48 194 Os12g0195500 9640.m00874 - - 1e-1 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.28 8e-44 178 Os12g0223900 9640.m01172 - - 2e+0 At1g28360 ERF12 (ERF DOMAIN PROTEIN 12) C.G. S.X.
0.21 1e-51 204 Os03g0706200 9631.m04865 - - 2e+0 At5g25940 early nodulin-related C.G. S.X.
0.06 4e-70 266 Os11g0471300 AK065835.1 - Conserved hypothetical protein 3e-2 At5g60945 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-2 38 Arabidopsis thaliana At1g15430 838114 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max HgAffx.13358.1.S1_at CB379461 - - 4e-1 At1g06980 unknown protein C.G. S.X.
0.02 2e-1 36 Hordeum vulgare Contig7955_s_at Contig7955 - - 4e-4 At3g45860 receptor-like protein kinase, putative C.G. S.X.
0.02 2e+0 34 Populus trichocarpa PtpAffx.131813.1.S1_at DN501567 hypothetical protein - 2e-9 At1g62350 - C.G. S.X.
0.03 4e-1 36 Triticum aestivum Ta.11403.1.A1_at BQ170022 - - 4e+0 At2g47870 glutaredoxin family protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1612980_at CD718165 - - 4e+0 At4g12090 cornichon family protein C.G. S.X.
0.02 3e+0 32 Zea mays Zm.1216.1.A1_at AI947882 IDP408 protein - 4e-1 At2g20740 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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