CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0449600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.82 95.0 Os11g0449600 AK099523.1 - Hypothetical protein 1e+0 At3g18960 transcriptional factor B3 family protein S.X. H.G.
0.85 96.1 Os08g0262500 AK060990.1 - Cytochrome P450 family protein 3e+0 At5g25752 RBL11 (RHOMBOID-LIKE PROTEIN 11) S.X. H.G.
0.68 87.5 Os10g0528900 AF402801.1 - Glutathione S-transferase, C-terminal domaincontaining protein 2e-4 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) S.X. H.G.
0.65 83.8 Os03g0658800 AK065238.1 - Cytochrome P450 family protein 2e-5 At4g15310 CYP702A3 S.X. H.G.
0.63 82.7 Os04g0353600 CB641510 - Male sterility protein family protein 2e+0 At1g35333 unknown protein S.X. H.G.
0.57 77.0 Os02g0308800 AK104533.1 - Beta-Ig-H3/fasciclin domain containing protein 2e+0 At5g43280 ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1) S.X. H.G.
0.55 73.7 Os04g0354600 AK065894.1 - Male sterility protein family protein 4e+0 At1g35333 unknown protein S.X. H.G.
0.55 73.7 Os02g0816300 AK071879.1 - Mast, C-terminal domain containing protein 1e-1 At5g63400 ADK1 (ADENYLATE KINASE 1) S.X. H.G.
0.50 68.0 Os03g0832800 AK062843.1 - Phospholipid/glycerol acyltransferase familyprotein 4e-2 At4g00400 GPAT8 (glycerol-3-phosphate acyltransferase 8) S.X. H.G.
0.48 63.7 Os09g0373200 AK109686.1 - Strictosidine synthase family protein 2e-1 At5g20540 ATBRXL4 (BREVIS RADIX-LIKE 4) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.7 99.2 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
17.1 98.8 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
16.7 98.8 GSM278853 KT95-418-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
13.3 98.4 GSM254096 Rice Control 1 GSE10054 Expression information of splicing factor OsSKIPa knock-down and overexpressed rice
13.3 98.4 GSM254091 Rice overexpressed OsSKIPa, biological repeat 1 GSE10054 Expression information of splicing factor OsSKIPa knock-down and overexpressed rice
13.0 98.4 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
12.3 98.3 GSM278845 WuYun3-RSV infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
11.7 98.2 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.3 98.2 GSM254097 Rice Control 2 GSE10054 Expression information of splicing factor OsSKIPa knock-down and overexpressed rice
10.4 98.1 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 38 Os02g0196100 AK108729.1 - The start codon is not identified. 1e-7 At3g20880 zinc finger (C2H2 type) protein (WIP4) C.G. S.X.
0.02 1e-1 38 Os01g0297700 AK106554.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At1g04778 unknown protein C.G. S.X.
0.02 1e-1 38 Os04g0283800 AK109869.1 - Octicosapeptide/Phox/Bem1p domain containingprotein 3e+0 At4g24026 unknown protein C.G. S.X.
0.01 3e-2 40 Os01g0868800 9629.m06426 - - 5e+0 At1g68670 myb family transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At3g18960 821429 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.66466.1.S1_at BM307970 - - 3e-1 At1g16000 unknown protein C.G. S.X.
0.04 1e-1 36 Hordeum vulgare Contig10137_at Contig10137 - - 1e+0 At5g65080 MAF5 (MADS AFFECTING FLOWERING 5) C.G. S.X.
0.04 2e+1 30 Populus trichocarpa PtpAffx.90488.1.S1_at BP921919 hypothetical protein - 4e+0 At5g67620 unknown protein C.G. S.X.
0.05 1e+0 34 Triticum aestivum TaAffx.65898.1.S1_at BJ223861 - - 4e+0 At5g09820 plastid-lipid associated protein PAP / fibrillin family protein C.G. S.X.
0.04 5e+0 30 Vitis vinifera 1617319_at CF373295 hypothetical protein LOC100246741 - 4e+0 Atcg00560 - C.G. S.X.
0.04 2e+0 32 Zea mays Zm.7397.1.A1_at BQ539216 hypothetical protein LOC100277233 - 5e-4 At3g05550 hypoxia-responsive family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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