CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0447300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os11g0447300 AK108044.1 - GTP-binding protein, HSR1-related domaincontaining protein 8e-4 At2g41670 GTP-binding family protein S.X. H.G.
0.67 87.2 Os08g0156900 AK073344.1 - DNA topoisomerase, type II family protein 4e-9 At1g63990 SPO11-2 (SPORULATION 11-2) S.X. H.G.
0.42 53.9 Os05g0417100 AK073199.1 - Peptidase S1C, hrtA/degQ family protein 4e-25 At5g36950 DegP10 (DegP protease 10) S.X. H.G.
0.40 51.1 Os12g0563400 AK067785.1 - Protein of unknown function DUF341 family protein 2e-8 At1g09280 - S.X. H.G.
0.29 31.1 Os04g0676300 9632.m05660 - Dihydroorotate dehydrogenase, mitochondrialprecursor (EC 1.3.3.1) (Dihydroorotate oxidase)(DHOdehase) 4e-21 At5g23300 PYRD (pyrimidine d) S.X. H.G.
0.22 19.4 Os03g0681900 AK062094.1 - Zn-finger, CCHC type domain containing protein 1e-2 At1g60650 glycine-rich RNA-binding protein, putative S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
75.1 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
21.9 99.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.6 98.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.4 98.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e-16 87 Os10g0572000 NM_197842.1 - GTP-binding protein, HSR1-related domaincontaining protein 6e-1 At5g64460 - C.G. S.X.
0.01 1e-1 40 Os04g0182300 9632.m00908 - Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein 5e+0 At1g01900 SBTI1.1 C.G. S.X.
0.01 1e-1 40 Os05g0115100 AK106226.1 - Eukaryotic DNA topoisomerases I, dispensableinsert domain containing protein 4e-2 At1g02965 unknown protein C.G. S.X.
0.01 4e-1 38 Os06g0102800 AK068790.1 - Hypothetical protein 8e-3 At1g58070 unknown protein C.G. S.X.
0.01 4e-1 38 Os10g0564500 AB125304.1 - - 4e-24 At1g10940 SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4) C.G. S.X.
0.01 2e+0 36 Os01g0359700 9629.m02500 - - 9e+0 At5g22570 WRKY38 C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 8e-4 46 Arabidopsis thaliana At2g41670 818765 GTP-binding family protein F:GTP binding;P:biological_process unknown;C:chloroplast;BOMFPA - - - C.G. S.X.
0.16 2e-36 155 Glycine max GmaAffx.66865.1.S1_at BU926377 - - 1e+0 At5g61660 glycine-rich protein C.G. S.X.
0.57 0 797 Hordeum vulgare Contig13019_at Contig13019 - - 2e-10 At2g41670 GTP-binding family protein C.G. S.X.
0.27 9e-20 99 Populus trichocarpa PtpAffx.206110.1.S1_at pmrna12113 hypothetical protein - 8e-34 At2g41670 GTP-binding family protein C.G. S.X.
0.08 4e-21 103 Triticum aestivum Ta.18233.1.S1_at CA632074 - - 1e+1 At4g39795 senescence-associated protein-related C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1622217_at CB977220 hypothetical protein LOC100240920 - 2e-21 At4g21320 HSA32 (HEAT-STRESS-ASSOCIATED 32) C.G. S.X.
0.03 5e+0 32 Zea mays Zm.842.1.A1_at BM337077 hypothetical protein LOC100273345 - 8e-3 At5g38910 germin-like protein, putative C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage