CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0439600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os11g0439600 AK069955.1 - Nod factor binding lectin-nucleotidephosphohydrolase 2e-1 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) S.X. H.G.
0.55 73.7 Os03g0804200 9631.m05800 - Plant lipid transfer protein/Par allergen familyprotein 3e-1 At2g36100 integral membrane family protein S.X. H.G.
0.53 71.3 Os03g0730500 AK066477.1 - Peptidase S10, serine carboxypeptidase familyprotein 6e-2 At2g23000 scpl10 (serine carboxypeptidase-like 10) S.X. H.G.
0.29 31.1 Os10g0472900 AK120294.1 - Naringenin-chalcone synthase family protein 3e-2 At1g07720 KCS3 (3-KETOACYL-COA SYNTHASE 3) S.X. H.G.
0.27 27.5 Os05g0456300 AK068616.1 - Aldose reductase 3e-6 At2g37790 aldo/keto reductase family protein S.X. H.G.
0.23 21.2 Os08g0401500 AK068301.1 - Mandelonitrile lyase-like protein 1e-12 At1g72970 HTH (HOTHEAD) S.X. H.G.
0.14 9.3 Os08g0460000 AB010876.1 - Germin-like protein 5 (Germin-like protein 1) 5e-1 At3g51060 STY1 (STYLISH 1) S.X. H.G.
0.13 8.2 Os10g0150400 CF308064 - Protein of unknown function DUF1210 family protein 2e+0 At5g14340 AtMYB40 (myb domain protein 40) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
22.4 99.3 GSM116401 Seedling_BAP treated_rep1 GSE5167 Rice seedling hormone treatment
20.8 99.2 GSM116195 Seedling_Control_rep1 GSE5167 Rice seedling hormone treatment
17.2 98.8 GSM116398 Seedling_Control_rep2 GSE5167 Rice seedling hormone treatment
15.9 98.7 GSM116399 Seedling_IAA treated_rep1 GSE5167 Rice seedling hormone treatment
15.7 98.7 GSM116402 Seedling_BAP treated_rep2 GSE5167 Rice seedling hormone treatment
15.4 98.7 GSM116400 Seedling_IAA treated_rep2 GSE5167 Rice seedling hormone treatment
14.5 98.6 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
13.6 98.5 GSM159270 Cold stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
12.2 98.3 GSM159268 Cold stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
11.8 98.3 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 1e-38 163 Os11g0126800 AK059453.1 - Hypothetical protein 9e-2 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) C.G. S.X.
0.28 1e-29 133 Os11g0126400 9639.m00234 - Nucleoside phosphatase GDA1/CD39 family protein 2e-1 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) C.G. S.X.
0.26 4e-26 121 Os12g0123500 AK072692.1 - Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase)(Adenosine diphosphatase) (ADPase)(ATP-diphosphohydrolase) 2e-4 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) C.G. S.X.
0.19 2e-28 129 Os11g0125900 BX928842 - Nucleoside phosphatase GDA1/CD39 family protein 6e+0 At1g26450 beta-1,3-glucanase-related C.G. S.X.
0.17 5e-10 67 Os12g0123600 AK100760.1 - Nucleoside-triphosphatase (EC 3.6.1.15)(Nucleoside triphosphate phosphohydrolase) (NTPase)(Apyrase) 4e+0 At3g46170 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.04 3e-8 61 Os07g0682800 AK066262.1 - Apyrase 7e-11 At3g04080 ATAPY1 (APYRASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At5g18280 831946 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. - - - C.G. S.X.
0.04 1e-3 46 Glycine max Gma.15856.2.S1_at BE059022 - - 7e-6 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) C.G. S.X.
0.27 6e-25 115 Hordeum vulgare Contig3332_at Contig3332 - - 2e-1 At3g21215 RNA-binding protein, putative C.G. S.X.
0.03 1e-3 46 Populus trichocarpa PtpAffx.211050.1.S1_at pmrna21708 hypothetical protein - 1e-6 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) C.G. S.X.
0.24 3e-13 77 Triticum aestivum Ta.27744.2.S1_a_at CA618050 - - 2e+0 At1g02813 unknown protein C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1609322_at CF415305 hypothetical protein LOC100244359 - 2e-32 At3g03070 NADH-ubiquinone oxidoreductase-related C.G. S.X.
0.04 2e-6 54 Zea mays Zm.3706.1.S1_at CO526030 hypothetical protein LOC100272244 - 2e-1 At3g04080 ATAPY1 (APYRASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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