CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0433200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os11g0433200 AK067867.1 - Peptidase A22B, minor histocompatibility antigenH13 family protein 5e-3 At1g01650 aspartic-type endopeptidase/ peptidase S.X. H.G.
0.61 81.2 Os06g0264300 AK061556.1 - UV excision repair protein Rad23 family protein 1e-12 At3g02540 RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) S.X. H.G.
0.35 41.7 Os01g0857700 AK066959.1 - Cell cycle control protein cwf14 2e-19 At4g21110 G10 family protein S.X. H.G.
0.32 36.3 Os02g0634900 AK059769.1 - Proteasome subunit alpha type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit B) (20S proteasome subunitalpha-2) 2e-59 At1g16470 PAB1 (PROTEASOME SUBUNIT PAB1) S.X. H.G.
0.24 22.4 Os07g0239400 AK068609.1 - Ethylene-responsive small GTP-binding protein 4e-76 At5g59840 Ras-related GTP-binding family protein S.X. H.G.
0.23 21.2 Os03g0801600 AK069591.1 - Vacuolar protein sorting-associated protein 35family protein 2e-37 At1g75850 VPS35B (VPS35 HOMOLOG B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.6 95.5 GSM195226 Root GSE7951 Genome-wide gene expression profiling of rice stigma
2.8 94.3 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
2.6 93.8 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
2.6 93.8 GSM431926 Root- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
2.5 93.6 GSM431925 Root- +Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
2.5 93.6 GSM159212 Seed (S2, 3 - 4 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
2.5 93.6 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
2.4 93.3 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
2.4 93.3 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
2.4 93.3 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-7 59 Os01g0914700 AK069261.1 - Peptidase A22B, minor histocompatibility antigenH13 family protein 3e-4 At1g05820 aspartic-type endopeptidase/ peptidase C.G. S.X.
0.01 2e-1 40 Os01g0582400 AK069484.1 - Peptidyl-prolyl cis-trans isomerase cypE (EC5.2.1.8) (Cyclophilin cypE) 1e-6 At4g33060 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.01 2e-1 40 Os05g0169800 9633.m00693 - Protein of unknown function DUF239 domaincontaining protein 2e-6 At5g50150 unknown protein C.G. S.X.
0.01 2e-1 40 Os07g0182400 AK103483.1 - AUX/IAA protein family protein 4e-8 At4g29080 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) C.G. S.X.
0.01 6e-1 38 Os07g0609500 9635.m04190 - - 2e-3 At4g09462 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e-3 44 Arabidopsis thaliana At1g01650 839499 aspartic-type endopeptidase/ peptidase F:peptidase activity, aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system, integral to membrane;MOPBF - - - C.G. S.X.
0.11 3e-11 71 Glycine max GmaAffx.55210.2.S1_at BE330623 - - 3e-32 At2g43070 protease-associated (PA) domain-containing protein C.G. S.X.
0.36 0 720 Hordeum vulgare Contig11156_at Contig11156 - - 2e-10 At2g43070 protease-associated (PA) domain-containing protein C.G. S.X.
0.08 8e-9 63 Populus trichocarpa PtpAffx.9076.1.A1_at CV252324 hypothetical protein - 1e-30 At2g43070 protease-associated (PA) domain-containing protein C.G. S.X.
0.33 5e-148 525 Triticum aestivum Ta.13399.1.S1_a_at CK195532 - - 1e-14 At2g43070 protease-associated (PA) domain-containing protein C.G. S.X.
0.03 6e-6 52 Vitis vinifera 1619701_at BM437347 hypothetical protein LOC100249763 - 1e-3 At2g43070 protease-associated (PA) domain-containing protein C.G. S.X.
0.02 9e-3 42 Zea mays Zm.8709.1.A1_at CF624906 - - 6e-6 At1g01650 aspartic-type endopeptidase/ peptidase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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