CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0432400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os11g0432400 AK068090.1 - 2-oxoglutarate/malate translocator 2e-13 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) S.X. H.G.
0.91 98.9 Os01g0938100 CB680541 - Photosystem II protein PsbW, class I familyprotein 2e+0 At3g44950 glycine-rich protein S.X. H.G.
0.91 98.9 Os01g0866400 BU667041 - Fructose-1,6-bisphosphatase (EC 3.1.3.11)(Fragment) 8e-38 At1g43670 fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative S.X. H.G.
0.73 91.1 Os02g0285800 AK099035.1 - GTP-binding protein TypA family protein 4e-62 At5g13650 elongation factor family protein S.X. H.G.
0.67 87.2 Os02g0593500 AK067498.1 - - 6e-18 At3g26570 PHT2 S.X. H.G.
0.63 82.7 Os08g0566600 AK066210.1 - Conserved hypothetical protein 3e-2 At2g05620 PGR5 (proton gradient regulation 5) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.6 98.7 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
12.3 98.3 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.5 98.2 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.1 98.2 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.4 98.1 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.2 98.0 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.8 98.0 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.7 98.0 GSM421722 MOCK, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.4 97.7 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM174884 E mock 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.51 0 674 Os05g0208000 AK063666.1 - 2-oxoglutarate/malate translocator 9e-16 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
0.03 1e-1 36 Os01g0963000 AK109480.1 - Peroxidase BP 1 precursor 6e-1 At5g40150 peroxidase, putative C.G. S.X.
0.02 2e-1 38 Os12g0177500 AK064771.1 - Peptidase A1, pepsin family protein 4e-3 At1g77480 nucellin protein, putative C.G. S.X.
0.02 1e-1 36 Os03g0824600 9631.m06006 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e+1 At5g67060 HEC1 (HECATE 1) C.G. S.X.
0.02 9e-1 36 Os03g0685000 AK059896.1 - Ferredoxin 5e-10 At1g32550 ferredoxin family protein C.G. S.X.
0.02 4e+0 34 Os04g0168100 9632.m00777 - Zn-finger, C2H2 type domain containing protein 7e-3 At2g42410 ZFP11 (ZINC FINGER PROTEIN 11) C.G. S.X.
0.01 2e-2 42 Os01g0276700 AK103164.1 - Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40)(PK) 2e-48 At4g26390 pyruvate kinase, putative C.G. S.X.
0.01 2e-2 42 Os01g0548600 AK110719.1 - Protein kinase domain containing protein 2e-2 At2g43950 OEP37 C.G. S.X.
0.01 2e-2 42 Os02g0101000 AK074023.1 - Amino acid/polyamine transporter II family protein 7e-5 At2g39130 amino acid transporter family protein C.G. S.X.
0.01 4e-2 38 Os11g0206700 AK069964.1 - Guanine nucleotide binding protein (G-protein),alpha subunit family protein 4e-29 At1g31930 XLG3 (extra-large GTP-binding protein 3) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 2e-13 77 Arabidopsis thaliana At5g19760 832096 dicarboxylate/tricarboxylate carrier (DTC) F:oxidative phosphorylation uncoupler activity, binding;P:transport, mitochondrial transport;C:in 6 components;MFPO - - - C.G. S.X.
0.24 5e-18 93 Glycine max Gma.11242.2.S1_a_at BQ298655 - - 3e-28 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
0.52 0 930 Hordeum vulgare Contig2784_at Contig2784 - - 2e-13 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
0.14 3e-13 77 Populus trichocarpa PtpAffx.640.1.S1_at CV247146 hypothetical protein - 2e-22 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
0.51 0 656 Triticum aestivum Ta.23311.1.S1_at CA622799 - - 4e-7 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
0.35 3e-28 125 Vitis vinifera 1613072_at BQ798026 similar to dicarboxylate/tricarboxylate carrier - 6e-29 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
0.49 2e-171 601 Zea mays Zm.12735.1.A1_at AI491263 hypothetical protein LOC100274318 - 6e-14 At5g19760 dicarboxylate/tricarboxylate carrier (DTC) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage