CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0426100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os11g0426100 9639.m02101 - - 2e-2 At3g29280 unknown protein S.X. H.G.
0.11 6.5 Os11g0262500 9639.m01451 - - 6e-1 At5g56050 - S.X. H.G.
0.10 5.7 Os04g0289800 9632.m02052 - Zn-finger, RING domain containing protein 1e-31 At1g57820 VIM1 (VARIANT IN METHYLATION 1) S.X. H.G.
0.02 1.0 Os01g0939700 AK110726.1 - Esterase D (EC 3.1.1.1) 7e-3 At2g41530 SFGH (S-FORMYLGLUTATHIONE HYDROLASE) S.X. H.G.
0.01 0.5 Os04g0193300 AK106803.1 - Cyclin-like F-box domain containing protein 1e-3 At5g35170 adenylate kinase family protein S.X. H.G.
0.01 0.5 Os01g0967250 NM_191494.1 - - 1e-1 At4g02465 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.5 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.3 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.2 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.2 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.1 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.8 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.5 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-6 56 Os08g0288000 AK099411.1 - Hypothetical protein 2e+0 At4g25170 - C.G. S.X.
0.02 3e-2 42 Os10g0108100 NM_194536.1 - - 4e-1 At4g08550 electron carrier/ protein disulfide oxidoreductase C.G. S.X.
0.01 5e-1 38 Os03g0637800 AK101339.1 - Protein kinase family protein 4e-17 At3g59420 ACR4 (ARABIDOPSIS CRINKLY4) C.G. S.X.
0.01 5e-1 38 Os04g0222800 9632.m01342 - - 1e+0 At5g55460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.01 2e+0 36 Os02g0136400 CB638965 - Conserved hypothetical protein 2e+0 At5g44560 VPS2.2 C.G. S.X.
0.01 2e+0 36 Os03g0278400 AK070052.1 - ADP ribosylation GTPase-like protein (Fragment) 3e-7 At2g37550 AGD7 C.G. S.X.
0.01 2e+0 36 Os07g0662500 D12821.1 - Elongation factor 1-beta' (EF-1-beta') 8e-25 At2g18110 elongation factor 1-beta, putative / EF-1-beta, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 42 Arabidopsis thaliana At3g29280 822585 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 1e+0 36 Glycine max GmaAffx.52114.1.S1_at CA852143 Heme oxygenase 3 (HO3) mRNA, partial cds; nuclear gene for chloroplast product - 5e+0 At3g28680 prolylcarboxypeptidase-related C.G. S.X.
0.01 7e+0 32 Hordeum vulgare HVSMEk0012K15r2_s_at HVSMEk0012K15r2 - - 8e-4 At3g29635 transferase family protein C.G. S.X.
0.02 5e+0 34 Populus trichocarpa PtpAffx.309.3.S1_at BP932852 ZIP transporter /// ZIP transporter - 4e+0 At5g60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f) C.G. S.X.
0.02 4e+0 34 Triticum aestivum TaAffx.8747.1.S1_at CA620800 - - 3e-1 At1g67350 unknown protein C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1621773_at CF209467 hypothetical protein LOC100250071 - 1e-1 At1g69870 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.02 1e-1 38 Zea mays Zm.2614.1.A1_at AY104863.1 - - 1e+0 At1g49480 RTV1 (related to vernalization1 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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