CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0308700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os11g0308700 9639.m01908 - - 6e-1 At4g33350 chloroplast inner membrane import protein Tic22, putative S.X. H.G.
0.61 81.2 Os01g0260300 9629.m01542 - - 1e-1 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.47 62.3 Os03g0791100 9631.m05665 - - 3e+0 At5g48860 unknown protein S.X. H.G.
0.44 58.1 Os05g0255200 9633.m01478 - - 7e+0 At4g09260 unknown protein S.X. H.G.
0.35 41.7 Os04g0348200 9632.m02648 - - 2e+0 At5g35300 unknown protein S.X. H.G.
0.15 10.3 Os02g0267500 9630.m01564 - - 9e+0 At5g43066 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
72.3 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.2 99.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.6 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.8 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Os03g0239066 9631.m01290 - - 1e+0 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) C.G. S.X.
0.03 1e+0 34 Os07g0433800 9635.m02426 - - 5e+0 At5g62720 integral membrane HPP family protein C.G. S.X.
0.01 2e-2 40 Os06g0302000 AK106070.1 - Hypothetical protein 3e+0 At1g06475 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-1 34 Arabidopsis thaliana At4g33350 829471 chloroplast inner membrane import protein Tic22, putative F:unknown;P:unknown;C:mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope;BPO - - - C.G. S.X.
0.05 6e-2 38 Glycine max GmaAffx.58462.1.S1_at BI974345 - - 1e-2 At3g12360 ITN1 (INCREASED TOLERANCE TO NACL) C.G. S.X.
0.03 1e+0 32 Hordeum vulgare HVSMEh0081E03r2_at HVSMEh0081E03r2 - - 2e-23 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.04 1e+1 30 Populus trichocarpa PtpAffx.43837.1.A1_s_at CV256587 hypothetical protein - 3e-6 At4g24026 unknown protein C.G. S.X.
0.05 3e+0 32 Triticum aestivum TaAffx.52592.1.S1_at CA704916 - - 3e+0 At5g03990 unknown protein C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1611981_at CF403805 - - 6e-2 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein C.G. S.X.
0.04 4e+0 30 Zea mays ZmAffx.985.1.A1_at AI834468 - - 1e+1 At4g36900 RAP2.10 (related to AP2 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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